Panicum virgatum (switchgrass): 120674326
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Entry
120674326 CDS
T07260
Name
(RefSeq) nuclear transcription factor Y subunit B-4-like
KO
K08065
nuclear transcription Y subunit beta
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120674326
Transcription factors [BR:
pvir03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Heteromeric CCAAT factors
120674326
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GFIT
Motif
Pfam:
CBFD_NFYB_HMF
Histone
CENP-T_C
Bromo_TP
DUF3152
Motif
Other DBs
NCBI-GeneID:
120674326
NCBI-ProteinID:
XP_039811433
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All DBs
Position
5N:complement(69888211..69889466)
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AA seq
164 aa
AA seq
DB search
MADHHGQGGRGGPGAEEIKEQDRLLPIANVGRIMKQILPPNAKISKEAKETMQECVSEFI
SFVTGEASDKCHKEKRKTVNGDDVCWAFGALGFDDYVDPMRRYLHKYRELEGDRAAAAAS
SRGGGGSTSTSAGPDAGAGAGPSSGHFMFGAMDRSDNNSSSRPF
NT seq
495 nt
NT seq
+upstream
nt +downstream
nt
atggccgaccaccacgggcagggggggcgcggcggcccgggggcagaggagatcaaggag
caggaccggctgctgcccatcgccaacgtcgggcgcatcatgaagcagatcctgccgccc
aacgccaagatctccaaggaggccaaggagacgatgcaggagtgcgtgtccgagttcatc
agcttcgtcaccggggaggcctccgacaagtgccacaaggagaagcgcaagaccgtcaac
ggcgacgacgtctgctgggccttcggcgccctcggcttcgacgactacgtcgaccccatg
cgcaggtacctccacaagtaccgcgagctcgagggcgaccgcgccgccgccgccgcgtcc
tcccgcgggggcgggggctccacgtccacctcggccggccccgacgccggggcaggagca
ggacccagcagcggtcatttcatgttcggcgccatggacaggagcgataacaacagctcc
tccaggcccttttaa
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