Panicum virgatum (switchgrass): 120674359
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Entry
120674359 CDS
T07260
Name
(RefSeq) calcium permeable stress-gated cation channel 1-like
KO
K21989
calcium permeable stress-gated cation channel
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvir02000
]
120674359
Transporters [BR:
pvir02000
]
Other transporters
Pores ion channels [TC:
1
]
120674359
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RSN1_7TM
PHM7_cyt
RSN1_TM
Motif
Other DBs
NCBI-GeneID:
120674359
NCBI-ProteinID:
XP_039811469
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Position
5N:complement(36234086..36244883)
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AA seq
768 aa
AA seq
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MANIKDIGLSAAINILGAIAFLLAFAFLRLQPINDRVYFPKWYLKGARESPSHGGTFVRK
FVNLDMRSYLKFLSWMPAALKMPEDELISHAGLDSAVYLRIYLVGLKIFAPISILAFSVL
VPVNWTNDTLEFSKVQHSNIDKLSISNIPVGSKRFIAHLTMAYVFTFWTCYVLLREYEII
AQMRLRFLASEKRRPDQFTVLVRNIPPDPDESIGELVEHFFLVNHPDHYLTHQVVYNANK
LAKLVKEKMKMQNWLDYYQLKFERNASKRPTTKTGFLGCFGAKVDAIEYYKTEIERIENE
EAEEREKIIKDPKSVVPAAFVSFRSRWGAAVCAQTQQTSNPTVWLTEWAPEPRDVYWDNL
CIPFVSLTVRRLIMAVAFFFLNFFYVIPIAFVQSLANLEGIEKAAPFLKPLIEIPTIKSF
IQGFLPGIALKIFLILLPSILMFMSKVEGLTSISSLERRSASKYYIFIFFNVFLASIIAG
SALEQLKSFLHQSANEIPRTVGVAIPMKATFFITYVMVDGWAGVAGEILRLKPLVIFHLK
NFFLVKTEKDREEAMDPGSIGFDSNEPQIQLYFLLGLVYAAVTPFLLPFILIFFAFAYIV
YRHQIINVYNQEYESAAAFWPSVHGRIITALIISQFLLLGLLSTKGAGQSTPVLLVLPVV
TFYFHKYCKNRYEPTFVKCPLQEAMKKDTLERARDPGFDLKGYLMTAYIHPVFKGDDDDE
KFSIVDEPEAEQVLVATKRQSRRNTPVPSKYNDSDSPSLPEIVNDQRL
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atggctaatattaaagatataggcctctctgcagctatcaatatattgggggccatagca
ttccttctagcatttgctttcctacgactgcagccaatcaatgatagggtttacttccca
aaatggtacctcaaaggtgcaagagagagcccaagtcatgggggtacatttgttcggaaa
tttgtcaatttggacatgcggtcgtacttgaagttcttaagttggatgcccgctgctctc
aaaatgcctgaggatgagttgattagccatgcagggcttgattcagctgtctatctgcgg
atttacttagttgggcttaaaatatttgctccgatctcaattctagcatttagtgttctt
gtccctgttaattggaccaatgatacgctggaattctcgaaggtacaacacagcaacatt
gataaactttcgatatcaaatatacctgttggatcaaaaaggtttatagcccatttgaca
atggcatatgttttcacattttggacctgctatgtactgttacgcgagtatgaaatcatt
gcacaaatgagactgcgttttcttgcatcagagaaacgcagaccagaccagttcacggtc
cttgtgcgtaatataccacctgatccagatgaatcaattggtgagcttgttgaacatttc
tttcttgtgaatcatcctgatcactatctgacgcaccaggttgtttacaatgcaaataag
cttgcaaaattggttaaagagaagatgaagatgcagaattggcttgactactatcagctg
aagtttgaaagaaatgcatctaagaggcctactactaagactggctttcttggttgtttt
ggtgccaaggtggatgctattgagtactacaaaacagaaattgagaggatagaaaatgaa
gaagcagaagagcgtgaaaagattataaaagatcccaaatcagttgtcccagcagcattt
gtttccttccgatcacgttggggcgcagcagtttgtgctcagacacaacaaaccagtaat
ccaactgtttggttgacggaatgggctccagaacctcgtgatgtgtactgggataatttg
tgtattccatttgtctcccttacagttcgaaggttgataatggcagtggcattcttcttt
ctgaacttcttttatgtgatcccaatagcatttgttcagtctcttgcaaatcttgaaggg
attgagaaggcagctccatttctgaagcctctgattgaaatacctactattaaatcattc
atccaaggtttccttcctggaattgctctgaagatattccttatactgctcccaagcata
ttaatgttcatgtctaaggttgaaggattgacatcgatatcttcactggaaagaagatct
gcatccaaatattatatcttcatattcttcaatgtgtttcttgcaagcattattgcagga
tctgctttagagcagctaaaaagctttcttcatcaatctgcaaatgaaataccgaggaca
gttggtgtagcaattccaatgaaggcaaccttttttataacatatgtcatggtcgatggt
tgggctggggtagctggtgaaatattaagattgaagccactggtaatcttccacttgaaa
aactttttcttggtcaagactgagaaagacagagaagaggcaatggaccctggcagtatt
ggttttgactcaaatgaacctcaaattcagctctatttcttacttggtcttgtctatgct
gcggtgacaccatttttgctccctttcatattgatattcttcgcgtttgcatacattgta
taccgccaccagataataaatgtgtacaatcaagaatatgagagtgcagcagcattttgg
ccaagtgttcatggacgtataatcacagcattgatcatatcacagttcctcctccttgga
ttacttagcacaaaaggtgctggccagtcaaccccggtgctccttgttcttccggttgta
accttttatttccacaagtattgcaagaatcgctatgaacctacttttgtgaaatgcccg
ttacaggaggcaatgaagaaggataccctagaacgtgcaagagatccaggatttgatctc
aaaggatatctgatgactgcctacatccacccagtattcaaaggtgacgacgacgacgag
aagttctcaattgtggatgaaccagaggcagagcaagtcctggtggcaaccaagcggcaa
tccaggcggaacacccctgtccccagtaaatacaatgactcggattcaccttctctgcct
gaaattgtaaatgatcagcggctgtaa
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