Panicum virgatum (switchgrass): 120674366
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Entry
120674366 CDS
T07260
Name
(RefSeq) splicing factor YJU2-like
KO
K28527
splicing factor YJU2
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120674366
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pvir03041
]
120674366
Spliceosome [BR:
pvir03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
120674366
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Saf4_Yju2
Benyvirus_14KDa
Motif
Other DBs
NCBI-GeneID:
120674366
NCBI-ProteinID:
XP_039811481
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All DBs
Position
5N:42404047..42409175
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AA seq
331 aa
AA seq
DB search
MGERKVLNKYYPPDFDPSKIPRRRQPKNQQIKVRMMLPMSIQCATCGTYIYKGTKFNSRK
EDVVGETYLGIQIFRFYFKCTKCSAEITFKTDPQNSDYTVESGASRNFEPWREQDEAADK
EKRKRDAEEMGDAMKALENRAMDSKQDMDILAALEEMRSMKSRHAGVSVDQMLEILKRSA
HEKEEKAIAELDEEDEELIKSITFRNSGFYVKRIEDDDDDDDDDDDEDLVLGQSSIITKI
NGSSESVTKPTDVLSKTSGSEGANKEGSKSWMPKFIVKPKSTSADPKRQKTESSAVQDNG
EAPVAEQKSEPAMQTNVLQSLCQNYDSDDSN
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgggtgagcgtaaggtgctgaacaagtactacccgccggacttcgacccgtcgaagatc
ccgcggcggcggcagcccaagaatcagcagatcaaggtgcgaatgatgctccccatgagc
atccaatgcgccacctgcgggacatacatctacaaaggcaccaagttcaactccagaaag
gaggatgtcgtcggagagacatacttgggaatacaaatatttaggttttacttcaagtgt
actaagtgttctgctgagatcactttcaaaacagaccctcagaattccgactacacagtg
gaatcaggggctagtcgaaattttgaaccttggcgggaacaggatgaggcagcagacaaa
gaaaagaggaagcgagatgctgaagagatgggtgatgcaatgaaagctctggagaataga
gcgatggactcaaagcaggacatggacatacttgctgctttagaagagatgcgctccatg
aagtctagacatgccggcgtctctgttgaccagatgcttgaaattttgaagcgttcagct
catgagaaggaggaaaaagcaattgcagagcttgacgaagaagatgaagaacttatcaag
tcaatcacttttcgaaactctggattttatgtaaagcggatagaagatgatgacgatgac
gatgacgatgacgatgacgaagatttggtcctaggtcaatcgagtataataacaaagatc
aatggttcttctgaatcagtgacaaagccaacagatgttttaagcaaaactagtggatca
gagggtgccaataaagaagggagcaagagctggatgcccaaatttatagtgaaaccaaag
tctactagtgcagatcctaagagacagaagactgaatcctcggctgtccaagacaacggc
gaagcaccagtagcagaacaaaagagtgaacctgcaatgcaaaccaatgttctccagtcc
ctctgccagaactacgacagcgatgatagtaactga
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