KEGG   Panicum virgatum (switchgrass): 120674367
Entry
120674367         CDS       T07260                                 
Name
(RefSeq) cullin-1-like isoform X1
  KO
K03347  cullin 1
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir04120  Ubiquitin mediated proteolysis
pvir04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    120674367
   04120 Ubiquitin mediated proteolysis
    120674367
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pvir04121]
    120674367
Ubiquitin system [BR:pvir04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Cullin
     120674367
SSDB
Motif
Pfam: Cullin Cullin_Nedd8
Other DBs
NCBI-GeneID: 120674367
NCBI-ProteinID: XP_039811482
LinkDB
Position
5N:24901995..24911134
AA seq 744 aa
MATHERKTIDLEQGWEFMQKGITKLKNILEGKPEPQFSSEDYMMLYTTIYNMCTQKPPHD
YSQQLYEKYRESFEEYITSMVLPSLREKHDEFMLRELVKRWSNHKVMVRWLSRFFHYLDR
YFISRRSLPPLREVGLSCFRDLVYQEIKGKVKSAVISLIDREREGEQIDRALLKNVLDIF
VEIGLGSMECYENDFEDFLLKDTADYYSIKAQTWILEDSCPDYMLKAEECLKREKERVAH
YLHSSSEQKLLEKVQHELLTQYASQLLEKEHSGCHALLCDDKVEDLSRMYRLFSRITRGL
EPVSQIFKQHVTNEGTALVKQAEDAASNKKPEKKDMVGLQEQIFVRKIIELHDKYVAYVT
ECFQGHTLFHKALKEAFEVFCNKGVSGSSSAELLATFCDNILKKGGSEKLSDEAIEDTLE
KVVRLLAYISDKDLFAEFYRKKLARRLLFDKSANDEHERSILTKLKQQCGGQFTSKMEGM
VTDLTVARDHQTKFEEFISSHPELNPGIDLAVTVLTTGFWPSYKSFDINLPSEMVKCVEV
FKEFYQTRTKHRKLTWIYSLGTCNISAKFEAKTIELIVTTYQAALLLLFNGADRLSYSEI
VTQLNLSDDDVVRLLHSLSCAKYKILNKEPSNKSISPNDVFEYNSKFTDKMRRIKVPLPP
VDEKKKVVEDVDKDRRYAIDASIVRIMKSRKVLGHQQLVMECVEQLGRMFKPDFKAIKKR
IEDLITRDYLERDKDNPNVYRYLA
NT seq 2235 nt   +upstreamnt  +downstreamnt
atggcgacgcacgagcggaagacgatcgatctggagcaggggtgggagttcatgcagaag
ggcatcaccaagctcaagaacatcctcgagggcaagcccgagccccaattcagctccgag
gactacatgatgctctacacgacgatttacaacatgtgcacgcagaagccgccgcacgac
tactcgcagcagctctacgagaagtaccgtgagtcatttgaggagtacatcacgtccatg
gtcttaccttccttaagggagaaacatgatgaatttatgttgagagagctagtaaaaagg
tggtcaaaccataaagtaatggttcggtggctatcacgcttcttccattatcttgatcgg
tacttcatttcccgaagatcactaccgccgcttagagaagttgggcttagttgtttcaga
gacttggtatatcaagagatcaaaggaaaagtaaaaagtgcagtcatatctttgattgac
cgagaacgtgaaggtgaacaaatagatagggccctgttgaagaatgttctggatatattt
gttgaaattggtttgggtagtatggagtgctatgaaaatgattttgaagatttcctgctt
aaagatactgccgattactactctatcaaggcccaaacctggatccttgaggattcttgt
ccggattatatgttaaaggctgaagaatgcctgaaaagggaaaaggagcgagttgcccat
tatttgcattctagcagtgagcagaagttattggagaaagtgcagcatgaactgctaact
cagtatgcaagccaactcttggagaaggagcattctgggtgtcatgcactactttgtgat
gacaaggttgaggatctgtctaggatgtatagactcttttccagaataactcgtggccta
gaacctgtttctcagatatttaagcagcatgttactaacgagggcacagctttagtcaag
caagcagaagatgctgctagcaataaaaagccagagaagaaggacatggttggtttgcaa
gaacagatctttgtccggaaaatcattgagctgcatgacaagtatgtagcatatgttaca
gagtgtttccagggccacacactctttcataaggcccttaaagaggcttttgaggttttc
tgcaacaaaggtgtttctggtagttcaagtgctgaattgctagccacattttgtgacaat
attttaaagaaaggtggcagtgaaaagcttagtgatgaagcaattgaagatacccttgag
aaggtggtcaggctgcttgcatacatcagcgataaggacttgtttgctgaattttacaga
aagaagcttgcgaggagattactttttgacaagagtgctaatgatgagcatgaaagaagc
atcctgaccaaactaaaacagcaatgcggagggcaattcacttcaaaaatggagggcatg
gttaccgatttgactgttgcaagagaccatcaaacgaaatttgaagagttcataagcagc
catccggagctgaatcctggaatagacttagctgttactgttctgacaacaggattctgg
ccaagctacaaatcttttgatattaatctaccttctgaaatggttaaatgcgtcgaggtt
ttcaaagagttttaccaaacaagaacaaagcacaggaagcttacctggatatattccctg
ggaacctgtaatatcagtgctaagtttgaggccaaaactattgagctcattgttacaact
tatcaggctgcattgctgctgctatttaatggagctgacaggcttagctattctgagatt
gtgacacagctaaacctctcagatgatgatgttgttcgccttctccattctctttcttgt
gcaaagtacaagattcttaacaaagaacctagtaataaatctatttcaccaaatgatgtc
tttgagtataattcaaaatttactgacaagatgcggagaataaaggtacctcttcctcca
gttgatgagaagaagaaagtagttgaagatgttgacaaggatcgtaggtatgcaattgat
gcatccattgtgcgcattatgaagagcaggaaagttttgggtcatcaacaacttgtaatg
gaatgcgtggaacagcttggtcgcatgttcaagccggacttcaaggcaataaagaagcgg
attgaggatcttattacaagggattacttggagagggacaaagataacccaaatgtgtat
agatacctggcttga

DBGET integrated database retrieval system