Panicum virgatum (switchgrass): 120674397
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Entry
120674397 CDS
T07260
Name
(RefSeq) probable lipid-A-disaccharide synthase, mitochondrial isoform X1
KO
K00748
lipid-A-disaccharide synthase [EC:
2.4.1.182
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00540
Lipopolysaccharide biosynthesis
pvir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
120674397
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pvir01005
]
120674397
Enzymes [BR:
pvir01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.182 lipid-A-disaccharide synthase
120674397
Lipopolysaccharide biosynthesis proteins [BR:
pvir01005
]
Lipid A
120674397
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LpxB
Motif
Other DBs
NCBI-GeneID:
120674397
NCBI-ProteinID:
XP_039811509
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All DBs
Position
5N:complement(57113069..57120173)
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AA seq
468 aa
AA seq
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MLLRWIAAAGRRRALPAKPLARALSYGRVVDAAARDGELRVFVVAGEVSGDSLASRLMAS
LKALSPVPVRFAGVGGELMCKEGLQSLFPMEEIAIMGLWELLPHIYSVKKKIGNTVNAAM
LFQPHAVVTVDSKGFSFRLLKQLKCRSNQKVQSPLHIHYVSPSFWAWKGGESRLSKLHDF
VDHMLCILPFEEEICRLNGLPATYVGHPLLDDAIGLNMGPELSHDNSKHQKSCEAFRLEH
GLSSDATIITIMPGSRMQEVVRMLPIFLHSVQNLRHTFHELSLVIPVAPHRDVRTYVEKA
VQSGPFPVVLIPGGSLKERYDAFSASRAALCTSGTAVMGLMLAKLPCVVAYQAHFITECL
IHLRKKINFISLPNILMNSPVVPEVLFRACTAKNLAANLSKVISNDDVRQMQVESAGQVF
QVLYEPIKKRGTLFVEELGLSSNVLSPSMIAALTVLYTDKHQNIVYRN
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgctactgcgatggattgcagccgcggggcgtcggcgagcgctgccagccaagcccctc
gcgcgcgcgctctcgtacggtagggtggtggacgccgcggctcgggacggggagctccgg
gtgttcgtggtcgcgggcgaggtctccggcgactcgctcgcctcgcggctcatggcgtcg
ctcaaggcgctctcgcctgtgcccgtccggttcgctggcgttggcggggaattaatgtgc
aaggaaggtttgcagtcacttttccccatggaagaaattgccattatgggcttgtgggag
ctgctgccacacatatatagtgtcaagaagaaaattgggaatactgtaaatgcagctatg
ttattccaacctcatgctgtggttacagttgattcaaaggggttctcttttcgcctattg
aagcaactgaaatgcagaagcaatcaaaaggttcaaagtcctctacatatccattatgtt
tcaccatcattctgggcctggaaaggtggtgaaagcaggctctcaaagctgcatgatttt
gtggatcacatgttgtgtattcttccatttgaggaagaaatatgcagattaaatgggttg
cctgctacttatgtgggtcatccattattggatgatgctattggcttgaacatgggacct
gaattgtctcatgacaactctaaacatcaaaagagttgtgaagctttccggctggaacat
gggctgtcctcagatgccacaatcataaccattatgccgggaagtaggatgcaggaggta
gttcgaatgcttccaatctttttgcattctgtgcaaaacttaaggcatacatttcatgaa
ctgtcactagtcatcccagttgctccacatcgagatgtgagaacctatgttgaaaaggct
gttcagtcagggccttttccagtggtgttgatacctgggggttcgcttaaggaaagatat
gatgcattcagtgctagtagagcagcattatgtacttcagggacagctgttatgggacta
atgcttgcaaaattaccctgtgtggtagcttaccaagctcatttcattacagaatgcttg
atccacttgaggaaaaagataaactttatttctctgcccaacattctcatgaactctcct
gttgtgcctgaggtcctttttcgagcttgtacagccaagaatctagctgcaaatctaagc
aaggttatttctaatgatgacgtccgtcagatgcaagttgaatcagctggccaagtattc
caggttctctatgaacccatcaagaaaaggggtactttatttgtcgaggagcttggcttg
tcgtcaaatgtcttatctcctagcatgatcgcagcactaacagtgctttatacagataaa
catcaaaatattgtgtaccggaattaa
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