Panicum virgatum (switchgrass): 120674411
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Entry
120674411 CDS
T07260
Name
(RefSeq) chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic-like isoform X1
KO
K27711
chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pvir03041
]
120674411
Spliceosome [BR:
pvir03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
120674411
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Gene cluster
GFIT
Motif
Pfam:
Pept_tRNA_hydro
Motif
Other DBs
NCBI-GeneID:
120674411
NCBI-ProteinID:
XP_039811533
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Position
5N:9199283..9203682
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AA seq
276 aa
AA seq
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MSLLTTATPTTSAHFSAPLLPSSHAHRRCVAAPLGRIRRPRLVPVVASVPDPAAGPMEYT
PWLIAGLGNPGNKYYGTRHNVSTDAAHLFVCIPTITVSFEVGFEMVDRIALEEGITMNTI
QSKSLLGVGSIGEVPVLLVKPQSYMNYSGEAIGPLAAYYQVPLRHILLVYDDMSLPNGVL
RIQRKGGHGRHNGLQNVIEQLDGRREFPRLSIGIGSPPGKMDTRAFLLQKFSSEERVQID
TALEQGVDAVRTLVLKGFSGSIERFNLVQKYKFHRV
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttgctcaccacggccactcccaccacctccgctcacttctccgcacccctcctc
ccctcctcccacgcgcaccgccggtgcgtcgcggcaccactcggccgcatccgccgtccg
cgcctggtccccgtcgtcgcctccgtccccgaccccgcggcggggccaatggagtacacg
ccctggctcatcgccggcctcggcaacccaggcaacaagtactacggcacgcggcacaat
gttagcacagacgcggcccatttgttcgtttgtattcccaccatcaccgtcagctttgag
gtggggtttgagatggtggatcgaattgcactggaggaggggatcacgatgaacacaatc
cagtccaagtcgctgctgggagtaggttcaattggcgaggtgccagtcttgctggtaaaa
ccacaatcatacatgaactacagtggggaggcgattggacctcttgcagcctattatcaa
gtaccgttacgacacatcctcttggtttatgatgacatgagtctgcccaatggtgtacta
aggattcaaaggaaaggtggtcatggtcgccacaatgggttacagaatgtgattgagcaa
ttggatggccgccgggagtttcctcgtttatctatcggcattggtagcccgcccggaaaa
atggacacacgagctttccttctgcagaagttcagttcagaggaacgagtgcagattgac
actgctctggagcaaggggtggatgctgtgaggacccttgtgcttaagggttttagcgga
agtattgaaagattcaacctggtgcagaagtacaagttccacagggtctga
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