Panicum virgatum (switchgrass): 120674694
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Entry
120674694 CDS
T07260
Name
(RefSeq) myosin-17-like
KO
K10357
myosin V
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
120674694
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvir03019
]
120674694
04131 Membrane trafficking [BR:
pvir04131
]
120674694
03029 Mitochondrial biogenesis [BR:
pvir03029
]
120674694
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pvir04812
]
120674694
Messenger RNA biogenesis [BR:
pvir03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
120674694
mRNA cycle factors
P-body specific factors
120674694
Membrane trafficking [BR:
pvir04131
]
Others
Actin-binding proteins
Myosins
120674694
Mitochondrial biogenesis [BR:
pvir03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
120674694
Cytoskeleton proteins [BR:
pvir04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
120674694
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
Myosin_N
IQ
nSTAND3
AAA_16
AAA_22
AAA_19
CbiA
Motif
Other DBs
NCBI-GeneID:
120674694
NCBI-ProteinID:
XP_039811766
LinkDB
All DBs
Position
5N:complement(41946644..41968938)
Genome browser
AA seq
1529 aa
AA seq
DB search
MGTPVNIIVGSHVWVEDPTLAWIDGEVVSIKNNEVHVQTSNGKKVTIDRSKVFPKDMEAP
PGGVDDMTRLSYLHEPGVLQNLATRYELNEIYTYTGSILIAVNPFQRLPHLYDTHMMEQY
KGADFGELSPHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAHLGGRS
GVEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKTGRISGAAIRTYLLE
RSRVCQINTPERNYHCFYFLCAAPPEDIQRYKLFDPRSFHYLNQSSCIEVDGINDAEEYL
ATRRAMDIVGINEEEQEAIFRVVAAVLHLGNIDFAKGTEIDSSVIKDDKSRFHLNTAAEL
LKCDCKNLEKALITRVIVTPEEIITRTLDPASAIASRDALAKTIYSRLFDWIVEKINVSI
GQDPNSKQLIGVLDIYGFESFKVNSFEQLCINYTNEKLQQHFNQHVFKMEQEEYTREEIN
WSYIEFVDNQDVLDLIEKKGGLIALLDEACMFPRSTHETFAQKLYTTFKNNKRFAKPKLS
RTDFTVVHYAGDVTYQADQFLDKNKDYVVAEHQDLLNASSCPFVAGLFPPLPQETSKSSK
FSSIGSRFKLQLQSLMETLSSTEPHYIRCVKPNNLLKPAIFENTNVIQQLRCGGVLEAIR
ISCAGYPTRKTFYEFVNRFGVLAPEVLEGSNDDKIACQKILEKMGLENYQIGKTKVFLRA
GQMADLDARRAEVLGRAARIIQRQICTYIAKKQFVELKKSATQLQSFVRGTLARKLYECM
RREAAAVKIQKNMRRHKARESYLQLQAAAITLQTGLRAMSARKEFRFRKETKAAVHIQAR
WRCHRDYSHYKNLQGAALTYQCAWRQRLARRELRKLKMAARETGALKEAKDKLEKRVEEL
TWRLGLEKRLRTDLEEAKAQEIAKLQETLHDMQLQVEEAKAMVVKEREAARKAIEEAPPV
VKETPVLVEDTEKINSLTAEVEQLKALLQTERQATEAAKREHAESERRNDELIKKFEGAE
KKIEQLQDTVQRLEEKATNMESENKVLRQQAVAISPTAKSLAAYPKSPFQLKAPENGNAL
NGEVKSSPDVTPISLNPKELEAEEKPQKSLNEKQQENQDLLIKCVSQDLGFSSGKPIAAC
LIYRCLLHWRSFEVERTGVFDRIIQTIGSAIESQDNNDKLAYWLSNSSTLLLLLQRTLKT
TGAAGLTPQRRRSSAASFGRVFSGMRASPQSAGRAFLGSRLIGGLGDLRQVEAKYPALLF
KQQLTAFLEKIYGMIRDNLKKEISPLLGLCIQAPRTSRASLIKGSRSQANALAQQTLIAH
WQSIVKILTNYLNVLKANFVPSFLISKVFTQIFSFINVQLFNSLLLRRECCSFSNGEYVK
AGLAELEQWCIYATEEYAGSSWEELKHIRQAVGFLVIHQKPKKTLKEITNDLCPVLSIQQ
LYRISTMYWDDKYGTHTVSSDVISNLRVMMTEDSNNSVSSSFLLDDDSSIPFSVDDISKS
MTEIEVTEVDMPPLIRENSGFTFLHQRKD
NT seq
4590 nt
NT seq
+upstream
nt +downstream
nt
atgggaactccagttaacatcatcgttggttctcatgtttgggtagaagacccaactcta
gcttggatagatggggaggttgttagcataaaaaacaatgaagtacatgtgcaaacatca
aatgggaaaaaggttaccatagacagatcaaaagtttttcccaaggatatggaagctcca
cctggaggagttgatgatatgacaagactgtcatacttacatgaacctggtgttcttcag
aatcttgctacccgctatgaactgaatgaaatatatacttacacaggcagcattttgatt
gctgtaaatccatttcaaagattgccacatctttatgatacccacatgatggaacaatac
aagggtgcagattttggggaattgagtccccatgtctttgctattgcggatgttgcttac
agggcaatgataaatgaagggaaaagcaactctatattggtcagtggtgaaagtggtgct
ggaaagactgagacaacaaagatgcttatgagatatctagcacacttaggtgggcgatct
ggagtagaaggacgtacagtagaacaacaagtcctagagtccaatccagttcttgaagct
tttggtaacgcaaaaactgtgcgaaacaacaactcaagtcgctttggcaagtttgttgag
atccaatttgacaagactggacggatctcaggagctgctatcagaacttacttgctggaa
agatcacgtgtgtgccaaattaataccccggaaagaaattatcattgcttttacttcctt
tgtgctgcaccacctgaggacattcagaggtataaactgtttgatcctagatccttccat
tacctcaaccagtcaagctgtatcgaggtggacggaattaatgacgccgaagaatattta
gcaacaagaagggccatggacatagttggaattaatgaggaagagcaggaagctatattc
agggttgtagcagctgtacttcaccttggaaatatagattttgccaagggaacagaaatt
gattcatctgtaatcaaggatgataagtccaggttccaccttaatactgcagcagaactt
ttgaaatgtgattgcaagaatttggaaaaagcgctgataactcgagtaatagtcacacct
gaagaaattattactagaacacttgatcctgcttctgcaattgctagcagagatgcatta
gccaaaacgatatactcccgattgttcgattggattgtggaaaaaattaatgtctcaatt
ggacaggacccaaactcaaaacaattgattggtgtacttgatatctatggttttgagagc
ttcaaagttaacagttttgaacagctatgtatcaattatacaaatgaaaagctgcaacaa
cattttaaccagcatgtgttcaaaatggaacaagaagagtataccagagaagagataaac
tggagttacatcgaatttgttgataatcaagatgtgctagacttgatagagaagaaaggt
ggattgattgcacttctggatgaagcatgtatgtttcctagatcaacacatgagacattt
gcgcagaagctatatacaacatttaagaataacaagcggtttgccaaaccaaaactttca
cgtactgattttacagtagtccattatgctggtgacgtgacataccaggctgaccaattc
ttagacaagaacaaagactatgtagtggctgaacatcaggatctgctgaatgcttcttca
tgcccgtttgtagctggtttattccctccactccctcaggagacatccaagtcctcgaaa
ttttcatccattggatcacgtttcaagctgcaacttcaatctctcatggaaacattgagc
tctactgaaccccactatattagatgcgtgaagccaaataatctcctaaagccagccatt
tttgagaatacaaatgttatacagcaactacgatgtggaggtgttcttgaagctatcagg
atcagctgtgctggataccccacaagaaaaacattttacgaatttgtcaatcgttttggt
gtccttgctcctgaagttttagaagggagcaatgatgataagatcgcgtgccagaagatt
ttggaaaaaatgggtctggagaactaccagattggaaaaacaaaggtgtttctgagagct
ggacagatggctgatttggatgcacgtagagctgaagtattaggaagagcagcaagaatc
atacagagacaaatatgtacatatattgcaaagaaacagtttgttgagcttaaaaaatca
gcaacacagctgcaatcttttgtcagaggaacgttggctcgcaagctgtatgagtgcatg
aggcgggaagcagcagcagtgaaaatacaaaagaatatgcgtcgccacaaagcacgagag
tcttatttacaactacaagcagctgcaatcacactgcagacaggcttaagggcaatgtct
gctcggaaagaattcagattcagaaaggaaacaaaagcagctgtccacatccaagctcga
tggcgctgccaccgagactactcacattacaagaatctgcaaggtgctgctcttacttac
cagtgtgcgtggagacaaaggcttgcgagaagagagctcagaaagctcaagatggccgca
agagaaacaggggcccttaaagaggccaaggataaacttgagaagcgtgttgaagaacta
acctggcgcttaggattggagaagcgattaaggactgaccttgaggaagcaaaagcccag
gaaattgctaagctgcaagaaacactgcatgacatgcagcttcaagttgaagaagcaaag
gccatggttgttaaggaaagagaagctgcaagaaaggcaattgaagaagcacctccagta
gtcaaagagactcctgtcctagtcgaagacactgaaaagattaactcactgacggccgaa
gttgaacagctaaaggctttgctgcaaactgaaaggcaagcaacagaagctgcaaaaaga
gaacatgctgaatctgaacggagaaatgatgaactaattaagaagtttgagggtgcagag
aaaaagattgagcaacttcaggacactgtccagaggctggaggagaaagcgaccaacatg
gaatctgagaacaaagtgctccgccaacaggctgttgcaatttctcctacagcaaagtca
ttagctgcatatcctaagtctcctttccagctgaaagctccggagaatgggaatgctcta
aatggagaagtgaagtcatcaccagatgtcacccctatctcactaaaccccaaggagctt
gaagctgaagagaagccacaaaaatcacttaacgagaagcagcaggaaaatcaagacctg
ctgatcaagtgtgtgtcacaagatctgggattctccagtggcaaacctattgcagcttgc
cttatctacaggtgtcttctacactggagatcatttgaagttgaaaggactggtgttttc
gaccgtattattcaaacaattggctctgctattgagtcccaggacaacaatgacaagttg
gcatattggctctcgaattcatctacactactgctgctgctgcaacgaacactgaaaaca
actggagcagctggactgactcctcaaagacgtaggtcatctgctgcgtcttttgggagg
gtgttttcggggatgcgagcctcaccacaaagcgcggggcgtgcttttctgggaagtcgg
ttgattggagggctaggtgatcttcgtcaagttgaagccaagtatcctgccctgcttttc
aagcagcagctcacagctttccttgagaagatctatggaatgataagagacaacttgaaa
aaggagatatctcctttgcttggtctttgcatccaggcaccaagaacatctcgtgctagt
ctaattaaaggatcacgatctcaagcaaatgccttagctcagcaaactctgattgcccat
tggcagagcattgtgaagatattgacaaattacttgaatgttttgaaagccaattttgtc
ccttcattcttaatcagcaaagtgttcacacaaatcttttcattcattaacgtccagttg
tttaatagtctgcttcttcgacgggagtgctgttcgtttagcaatggagaatatgtgaaa
gctgggttggcagaactagaacagtggtgcatttatgcaactgaagagtatgcaggttcc
tcttgggaagaattaaaacatattaggcaggctgttggattccttgtaattcaccaaaag
ccaaagaaaacattgaaagaaattaccaacgatttgtgccctgtccttagcatacaacaa
ctgtatagaatcagtacaatgtattgggatgataagtatggtacccacactgtttcttca
gatgtcatctcaaatttgagagtaatgatgacggaagattctaataattcagtgagcagc
tctttcttgttggatgatgattcgagcatcccattttcagtggatgacatctcaaaatcg
atgacagaaatcgaggtaacagaagtcgatatgccacctttgatccgggagaactctgga
tttaccttcctacaccaaagaaaggattaa
DBGET
integrated database retrieval system
