KEGG   Panicum virgatum (switchgrass): 120674732
Entry
120674732         CDS       T07260                                 
Name
(RefSeq) AP-3 complex subunit delta-like
  KO
K12396  AP-3 complex subunit delta
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir04142  Lysosome
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome
    120674732
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pvir04131]
    120674732
Membrane trafficking [BR:pvir04131]
 Endosome - Lysosome transport
  Others
   AP-3 complex
    120674732
 Endosome - Golgi transport
    120674732
SSDB
Motif
Pfam: Adaptin_N Cnd1 HEAT_2
Other DBs
NCBI-GeneID: 120674732
NCBI-ProteinID: XP_039811800
LinkDB
Position
5N:29510733..29514169
AA seq 1021 aa
MELRQIMVVATAAAANSSDAVVGRGRVQGPICICLLKKKSHTPSASPSSRPPPHVLKLPP
KPHGSSLLPFRQSRWPLPIRRRRRPATAHTAAPSLVDTLFQRSLDDLIKSLRADPSAAGE
SAAVARALSEIHHEIRAPDAATKAVALQKLTYLSSLHFTPVASHPLAFPAIELLASPSLP
HKRLAYLAASLSLHPASLSLLPLATHQLHKDLSPSASASAATTHWHVPALALQLLGSPAT
AAAATDLAVHLAHDLVPHLSRGSPRAIAAAARVISGAPSAAVPVLFKPLAACLASPDSRA
STAAAAAFCDLSAPPADAAPFLPLAPDLYNLLTTSRSNWELIKVVKLFARLTPLESRLAA
RIVDPVCQLLTRSAAVSLTFECVRTVLTALPAHDAAVHLAIAKAKEFLAADDDPNLRYLG
LLALGMLGPGYATTVNDCRDVIVRSLDDADSNIRREALHLMMEMFDENNVMDIASMLVSH
AAKSDPEFANDILGAVLAACGRNVYELVVDFDWYASLLADMARSLHCAQGDEIGRQLVDV
GLRVQDARSELVRSARTLLIDPALLGNHFLCPVLSAAAWISGEYVDFMKDPVELVEALLQ
PKTSLLPMSVRAVYMHAVFKVLTFCVSVYVEKLGDSSKEVDVDVDVVFSGLAIDQTVHQE
GKVALGSAEEQDIRASTLQKDPFSHESILYVINLIETTVGPLVECNEVEVQERAHNLIGF
VHLIRHIQELKENKVADDDKQIRVKELVKTMRTIFCQELGPVSATAHMKVASPDGLNLNE
NLAELRDIVSEDDTAPSTSIFFYPRHHDSVDTRDDPAVSIGSSSLSEHRKRHGLFYLPTG
KIEDELSDYPHANDTLPSCSNETVSDEKSKTVEPLFAGKKSKSTKSRPKVVKLDGEDFLS
SMMATTNVPKEDPLSGALRCVLLGRDAMASPSQKVSDLNSEAMLKKMGTNESTFQRIENL
GSHPASSSVTSKQNHDNAKESRKHRSSGRSGHRQGKHEHRERSSTQPDIVPQAPVIQDFL
L
NT seq 3066 nt   +upstreamnt  +downstreamnt
atggagcttcgtcagatcatggtggtggcgacggcggcggcggcaaattcgtccgatgct
gttgttggaaggggaagggtccagggacctatttgtatatgtttgctcaaaaaaaaaagc
cacacaccaagcgcgagtccttcgtctcggccgcccccgcacgttctcaagttaccccca
aaaccacacggatccagcctcttacccttccgccaaagccgatggcctctgcccatccgg
cgccggcgccggccggcgacggcgcacacagcggcgccgtctctggtggacaccctcttc
cagcgctccctggacgacctcatcaagtccctccgcgccgacccgtcggccgccggcgag
tccgcggccgtcgcccgcgcgttgtccgagatccaccacgagatccgcgcccccgacgcc
gcaaccaaggccgtcgcactacagaagcttacctacctctcctccctccacttcaccccc
gtcgcctcccacccactcgctttcccggccatcgagctcctcgcctcgccaagcctgccc
cacaagcgcctcgcctacctcgccgcctcgctctcgctacacccggcctcgctatccctg
ctcccgcttgccacgcaccagctacacaaggacctttccccctccgcctccgcctccgcc
gccacgacccactggcacgtccccgcgcttgcgctccagctcctcggatcccccgccacc
gccgccgccgcaacggacctcgccgttcacctcgcgcacgatctcgtgccacacctctcc
cgcggcagtccacgcgccatcgcggccgccgcgcgcgtcatatccggcgcgccgtccgcg
gccgtgccggtcctcttcaagccgctggcagcctgtctcgcatcccctgactcgcgggcg
tcgactgcggctgcagcagcgttctgtgacctgtcagcgccgcctgctgacgcggcccct
ttcctgcctctggcgcctgatctctacaacctgctcaccacttcccggtccaactgggaa
ctcatcaaggtggtcaagctgtttgcacggctgactcctctagagtcccggcttgccgct
cgaattgtcgacccagtctgccagctcctgacccgatctgcagccgtgtcactgactttt
gagtgtgtccgtacagtgctcactgcgctgccagcacatgacgccgctgtccaccttgcc
attgcaaaagcgaaggagttccttgctgctgatgatgatcccaacctccggtaccttggg
ctactggcgcttggtatgcttggcccaggttatgcaacaacagtgaatgattgccgggat
gttattgtgcggtcactggatgatgccgactcaaacattcgccgggaggcattgcacctc
atgatggagatgtttgatgaaaacaacgtaatggacattgcgagtatgttggtcagtcat
gctgcaaagtcagacccagagttcgcaaatgacattctcggggccgttctagcagcatgt
gggcgtaatgtgtatgagctggttgtggactttgattggtatgcttcactccttgcagac
atggcaaggagccttcattgcgcccagggagatgagattggtcggcagcttgttgatgtg
ggattgcgggtgcaggatgcacggtcagagcttgtccgttcagctcgaactctcctaatt
gaccctgctttgcttggaaaccacttcctctgccctgttctttcagctgccgcatggatt
tctggtgagtatgtggacttcatgaaggatcctgtcgagcttgttgaagcactcttgcaa
ccaaagaccagcctcctgcctatgtccgttcgagcagtctacatgcatgcagtgtttaag
gtgctcactttctgtgtgagtgtgtatgttgagaaattgggtgattcaagcaaggaagtg
gatgtggatgtggatgtagtgtttagtgggttggctattgatcaaactgttcatcaggaa
ggcaaggttgcacttgggtctgctgaagagcaagatattagggcaagcacattgcaaaag
gacccattttcacatgaatctatactttacgtgattaacttgattgaaactacagttggc
ccacttgttgagtgtaatgaagtagaagtccaggagagagcacacaacctgattggtttt
gtccatttgataagacatattcaagaattgaaagaaaataaggttgctgatgatgacaag
caaatcagggtaaaagagcttgtcaaaactatgcggacaatattctgtcaagaacttggt
cctgtttctgcgactgcacatatgaaagtagcctctccagatggtcttaacctgaatgag
aatcttgctgaactcagagacattgtgagtgaagatgatactgctccgtcaacttcaatc
tttttttatcctcgtcaccatgattctgtagatacaagagatgatcctgcagtgtcaatt
ggttcatcttctctttctgagcatcgcaaaaggcatgggctcttttatctccccacagga
aaaattgaggacgagctaagtgattacccccatgccaatgatactctaccatcttgtagc
aatgaaactgttagtgatgaaaagtcgaagaccgttgaacctttatttgctgggaaaaag
tcgaagtccacaaagtccagaccaaaagtagttaaattggatggtgaggatttcctcagt
tctatgatggccaccacaaatgttccaaaagaagaccccttgtctggtgctctacgttgt
gtgctcttgggtagagatgctatggcatcaccttcacaaaaggtttcagatttaaactct
gaagcaatgctaaaaaaaatgggcactaatgaatctacctttcagcggatagagaattta
ggaagccatcctgcgtcaagttctgtaacaagtaaacaaaaccatgacaatgccaaagaa
tcgagaaagcacaggagctctggtagaagtggacatcgccaaggaaaacatgagcacaga
gaaaggtctagtactcagcctgatattgtacctcaagctccagttatccaagacttcctt
ctatag

DBGET integrated database retrieval system