Panicum virgatum (switchgrass): 120674732
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Entry
120674732 CDS
T07260
Name
(RefSeq) AP-3 complex subunit delta-like
KO
K12396
AP-3 complex subunit delta
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
120674732
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120674732
Membrane trafficking [BR:
pvir04131
]
Endosome - Lysosome transport
Others
AP-3 complex
120674732
Endosome - Golgi transport
120674732
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Cnd1
HEAT_2
Motif
Other DBs
NCBI-GeneID:
120674732
NCBI-ProteinID:
XP_039811800
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All DBs
Position
5N:29510733..29514169
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AA seq
1021 aa
AA seq
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MELRQIMVVATAAAANSSDAVVGRGRVQGPICICLLKKKSHTPSASPSSRPPPHVLKLPP
KPHGSSLLPFRQSRWPLPIRRRRRPATAHTAAPSLVDTLFQRSLDDLIKSLRADPSAAGE
SAAVARALSEIHHEIRAPDAATKAVALQKLTYLSSLHFTPVASHPLAFPAIELLASPSLP
HKRLAYLAASLSLHPASLSLLPLATHQLHKDLSPSASASAATTHWHVPALALQLLGSPAT
AAAATDLAVHLAHDLVPHLSRGSPRAIAAAARVISGAPSAAVPVLFKPLAACLASPDSRA
STAAAAAFCDLSAPPADAAPFLPLAPDLYNLLTTSRSNWELIKVVKLFARLTPLESRLAA
RIVDPVCQLLTRSAAVSLTFECVRTVLTALPAHDAAVHLAIAKAKEFLAADDDPNLRYLG
LLALGMLGPGYATTVNDCRDVIVRSLDDADSNIRREALHLMMEMFDENNVMDIASMLVSH
AAKSDPEFANDILGAVLAACGRNVYELVVDFDWYASLLADMARSLHCAQGDEIGRQLVDV
GLRVQDARSELVRSARTLLIDPALLGNHFLCPVLSAAAWISGEYVDFMKDPVELVEALLQ
PKTSLLPMSVRAVYMHAVFKVLTFCVSVYVEKLGDSSKEVDVDVDVVFSGLAIDQTVHQE
GKVALGSAEEQDIRASTLQKDPFSHESILYVINLIETTVGPLVECNEVEVQERAHNLIGF
VHLIRHIQELKENKVADDDKQIRVKELVKTMRTIFCQELGPVSATAHMKVASPDGLNLNE
NLAELRDIVSEDDTAPSTSIFFYPRHHDSVDTRDDPAVSIGSSSLSEHRKRHGLFYLPTG
KIEDELSDYPHANDTLPSCSNETVSDEKSKTVEPLFAGKKSKSTKSRPKVVKLDGEDFLS
SMMATTNVPKEDPLSGALRCVLLGRDAMASPSQKVSDLNSEAMLKKMGTNESTFQRIENL
GSHPASSSVTSKQNHDNAKESRKHRSSGRSGHRQGKHEHRERSSTQPDIVPQAPVIQDFL
L
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atggagcttcgtcagatcatggtggtggcgacggcggcggcggcaaattcgtccgatgct
gttgttggaaggggaagggtccagggacctatttgtatatgtttgctcaaaaaaaaaagc
cacacaccaagcgcgagtccttcgtctcggccgcccccgcacgttctcaagttaccccca
aaaccacacggatccagcctcttacccttccgccaaagccgatggcctctgcccatccgg
cgccggcgccggccggcgacggcgcacacagcggcgccgtctctggtggacaccctcttc
cagcgctccctggacgacctcatcaagtccctccgcgccgacccgtcggccgccggcgag
tccgcggccgtcgcccgcgcgttgtccgagatccaccacgagatccgcgcccccgacgcc
gcaaccaaggccgtcgcactacagaagcttacctacctctcctccctccacttcaccccc
gtcgcctcccacccactcgctttcccggccatcgagctcctcgcctcgccaagcctgccc
cacaagcgcctcgcctacctcgccgcctcgctctcgctacacccggcctcgctatccctg
ctcccgcttgccacgcaccagctacacaaggacctttccccctccgcctccgcctccgcc
gccacgacccactggcacgtccccgcgcttgcgctccagctcctcggatcccccgccacc
gccgccgccgcaacggacctcgccgttcacctcgcgcacgatctcgtgccacacctctcc
cgcggcagtccacgcgccatcgcggccgccgcgcgcgtcatatccggcgcgccgtccgcg
gccgtgccggtcctcttcaagccgctggcagcctgtctcgcatcccctgactcgcgggcg
tcgactgcggctgcagcagcgttctgtgacctgtcagcgccgcctgctgacgcggcccct
ttcctgcctctggcgcctgatctctacaacctgctcaccacttcccggtccaactgggaa
ctcatcaaggtggtcaagctgtttgcacggctgactcctctagagtcccggcttgccgct
cgaattgtcgacccagtctgccagctcctgacccgatctgcagccgtgtcactgactttt
gagtgtgtccgtacagtgctcactgcgctgccagcacatgacgccgctgtccaccttgcc
attgcaaaagcgaaggagttccttgctgctgatgatgatcccaacctccggtaccttggg
ctactggcgcttggtatgcttggcccaggttatgcaacaacagtgaatgattgccgggat
gttattgtgcggtcactggatgatgccgactcaaacattcgccgggaggcattgcacctc
atgatggagatgtttgatgaaaacaacgtaatggacattgcgagtatgttggtcagtcat
gctgcaaagtcagacccagagttcgcaaatgacattctcggggccgttctagcagcatgt
gggcgtaatgtgtatgagctggttgtggactttgattggtatgcttcactccttgcagac
atggcaaggagccttcattgcgcccagggagatgagattggtcggcagcttgttgatgtg
ggattgcgggtgcaggatgcacggtcagagcttgtccgttcagctcgaactctcctaatt
gaccctgctttgcttggaaaccacttcctctgccctgttctttcagctgccgcatggatt
tctggtgagtatgtggacttcatgaaggatcctgtcgagcttgttgaagcactcttgcaa
ccaaagaccagcctcctgcctatgtccgttcgagcagtctacatgcatgcagtgtttaag
gtgctcactttctgtgtgagtgtgtatgttgagaaattgggtgattcaagcaaggaagtg
gatgtggatgtggatgtagtgtttagtgggttggctattgatcaaactgttcatcaggaa
ggcaaggttgcacttgggtctgctgaagagcaagatattagggcaagcacattgcaaaag
gacccattttcacatgaatctatactttacgtgattaacttgattgaaactacagttggc
ccacttgttgagtgtaatgaagtagaagtccaggagagagcacacaacctgattggtttt
gtccatttgataagacatattcaagaattgaaagaaaataaggttgctgatgatgacaag
caaatcagggtaaaagagcttgtcaaaactatgcggacaatattctgtcaagaacttggt
cctgtttctgcgactgcacatatgaaagtagcctctccagatggtcttaacctgaatgag
aatcttgctgaactcagagacattgtgagtgaagatgatactgctccgtcaacttcaatc
tttttttatcctcgtcaccatgattctgtagatacaagagatgatcctgcagtgtcaatt
ggttcatcttctctttctgagcatcgcaaaaggcatgggctcttttatctccccacagga
aaaattgaggacgagctaagtgattacccccatgccaatgatactctaccatcttgtagc
aatgaaactgttagtgatgaaaagtcgaagaccgttgaacctttatttgctgggaaaaag
tcgaagtccacaaagtccagaccaaaagtagttaaattggatggtgaggatttcctcagt
tctatgatggccaccacaaatgttccaaaagaagaccccttgtctggtgctctacgttgt
gtgctcttgggtagagatgctatggcatcaccttcacaaaaggtttcagatttaaactct
gaagcaatgctaaaaaaaatgggcactaatgaatctacctttcagcggatagagaattta
ggaagccatcctgcgtcaagttctgtaacaagtaaacaaaaccatgacaatgccaaagaa
tcgagaaagcacaggagctctggtagaagtggacatcgccaaggaaaacatgagcacaga
gaaaggtctagtactcagcctgatattgtacctcaagctccagttatccaagacttcctt
ctatag
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