Panicum virgatum (switchgrass): 120674846
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Entry
120674846 CDS
T07260
Name
(RefSeq) BRAP2 RING ZnF UBP domain-containing protein 2-like isoform X1
KO
K10632
BRCA1-associated protein [EC:
2.3.2.27
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120674846
Enzymes [BR:
pvir01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120674846
Ubiquitin system [BR:
pvir04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120674846
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRAP2
zf-UBP
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-rbx1
zf-RING_UBOX
zf-RING_11
zf-ANAPC11
zf-C3HC4_3
UPF0242
Motif
Other DBs
NCBI-GeneID:
120674846
NCBI-ProteinID:
XP_039811915
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All DBs
Position
1K:complement(6727064..6731381)
Genome browser
AA seq
486 aa
AA seq
DB search
MATAGKPAASLPAAAAPSTSSHALVSVHFSSGNPRIEETRGVVLLHPDPPAAASSPHLPV
GRKPRVCVLALPNHMTYADFCRFCGAFVPHTLEMRIVRTDDAEDQYSVLINFDSQNSTDN
FYKHFNGNQFSSLEGDVCHVRFVEDVHYTQLIEHAHSSVTSLTEQPTCPVCLERLDQDPG
GVLTTICNHSFHCSCISKWTDSSCPVCRYCQQQPEKSMCSICGTSENLWICVICGHVGCG
RYKGGHAIEHWKETQHCYSLELETQKVWDYAGDNYVHRLIQSKTDGKLVEYNCHGGHTAE
NTCSLCSGDAAMSEALLNSKFEAIVEEYNDLVTSQLEKQRNYYESLLLEDKEETDKEIAA
AVEKAVSIKVQKLEAKIDKCTEEKRFLDEVNGNLVKNQEKWIETIRNSQAREQAALRSKD
EKIEKLQEEIRDLIAHFECQNAIAQAPDSISSDIQGGTILPVASLASSSNSSRSSPVRGT
MNGKLK
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgccgggaagcccgccgcctctctgcccgctgcagccgcgccctccacatcc
tcccacgcgctcgtttctgtccacttctcctcggggaacccccgcatcgaggagacccgc
ggcgtcgtcctcctccaccccgacccgcccgccgccgcctcctcgcctcatctcccggtg
gggaggaagccgcgggtatgcgtgctcgcgctgcccaatcacatgacctacgccgacttc
tgccgcttctgcggcgccttcgtcccccatacactcgagatgcgcattgtcaggactgat
gatgcagaggaccagtatagtgttcttataaatttcgactctcagaactccacagacaac
ttttataagcacttcaatgggaatcagttctcttcgctggagggggatgtttgccatgtc
cgttttgtggaagatgtgcactacactcaattgattgagcatgcacatagctcagttaca
agtttgactgagcaacctacatgtccagtatgtcttgaacgacttgaccaagatcctgga
ggcgttctcacaacaatctgcaatcattctttccactgctcgtgcatatcaaaatggaca
gactcatcatgcccggtctgtagatattgtcagcagcaaccagagaaatccatgtgttct
atttgcggaacttcggagaatctttggatatgtgtaatctgtggccatgttggctgtgga
aggtacaaaggcggccatgctatcgaacactggaaggaaactcaacattgctattcactt
gaattagagacacagaaagtttgggactatgccggggacaactatgtccatcggcttatt
cagtcaaaaacagatggaaagctagttgagtacaattgccatggtggtcacacagcagag
aacacatgttcactatgcagcggtgatgccgcaatgagtgaagctctactgaacagtaaa
tttgaagctattgttgaagagtacaatgatcttgtcacgtctcagcttgaaaagcaaaga
aattactatgagtcacttctattagaagacaaagaggaaactgataaagaaattgctgct
gctgttgagaaagctgtgagcataaaagtccaaaagttggaagcaaagattgacaaatgc
acagaagagaaaaggtttcttgatgaagttaatggcaatcttgtcaagaatcaggagaag
tggattgagacaatacgaaactcacaagcaagggagcaagctgccctcagatcgaaagat
gaaaagattgaaaaactgcaagaagagataagagacttgatagctcacttcgagtgccaa
aatgccattgcacaagctcctgactcgatctcaagcgatatacaaggggggacaattctt
cctgtagcatccttggcttcctcaagcaacagcagcagaagcagccctgttcgtggcacg
atgaatgggaagctgaagtga
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