Panicum virgatum (switchgrass): 120674870
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Entry
120674870 CDS
T07260
Name
(RefSeq) putative pectinesterase 11
KO
K01051
pectinesterase [EC:
3.1.1.11
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00040
Pentose and glucuronate interconversions
pvir01100
Metabolic pathways
Module
pvir_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
120674870
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.1 Carboxylic-ester hydrolases
3.1.1.11 pectinesterase
120674870
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Motif
Pfam:
Pectinesterase
Motif
Other DBs
NCBI-GeneID:
120674870
NCBI-ProteinID:
XP_039811906
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Position
5N:47710495..47716740
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AA seq
329 aa
AA seq
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MQSPAAGSCLLLLVVVTVLAAGSASAATLAPVEFSIVDYARSDERVLTVTVDQSGKGNYT
RIQDAINAVPVPGSSRSAGGVLIEIMPGTYRRVNMHLSPCNFMDMQANLAGSTSQAQYYE
KVVVNKSKISLIGMSASSTIVTWSGKWTTYGESATLSVLASDFVAGNITFQNTYGRGTPA
LAARVTRDRAAFYGCRFVSYQDTILDDKGLHYYSDCYAQGATDFIFGPGKAFFEKCHLHS
TSTEHGAFTAQGRPAASENSGFSFVECSLTGVEASKSILGRPWRAYALVVFARCNISNTV
DPVGWNNWDTPTNERTAFFGQFQCYGEGS
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgcaatccccagcagctgggagctgtctgttactcctcgtcgtcgtcaccgtccttgcg
gcgggctcggcttccgccgccaccctcgcgccggtggagttcagcatcgtcgactatgcg
agatcggacgaacgggtactcactgttactgttgaccagtcgggcaagggcaactacacc
aggatacaggacgcgatcaacgccgttcccgtcccgggaagcagcaggtccgctggcggg
gtcctcatcgagataatgccgggcacttacaggcgagtaaacatgcatttatcaccctgc
aatttcatggatatgcaagctaatctagctggatcgaccagtcaggctcagtattacgag
aaagtcgtggtgaacaagagcaaaatctcccttatcggtatgagcgccagctctaccatc
gtcacatggagtggaaaatggaccacctatggcgaaagcgcgactctctccgtgttggcc
tctgacttcgtcgccggcaacattacatttcagaacacgtatggccgcggcacgccggcg
cttgctgcgagggttacccgagacagggctgcgttctacggatgcagatttgtgtcgtac
caggacacaattctagatgacaaagggctccactattactctgattgttacgcgcagggc
gctacagacttcatattcggcccaggcaaggccttctttgagaagtgccacttgcactcc
acctcgacagagcacggagcattcacagcgcaggggcggccagcggcatcggagaattca
ggattcagttttgtcgagtgcagcttgactggcgtcgaggccagcaagtccatcctgggg
cggccgtggcgcgcttacgccctggttgtgtttgcccgctgcaacatatccaacacggtg
gatccggtgggatggaacaactgggatacacctacgaatgagaggacggcattcttcggc
cagttccagtgctacggcgaaggatcctga
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