Panicum virgatum (switchgrass): 120674916
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Entry
120674916 CDS
T07260
Name
(RefSeq) caffeoylshikimate esterase-like
KO
K18368
caffeoylshikimate esterase [EC:3.1.1.-]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00940
Phenylpropanoid biosynthesis
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09110 Biosynthesis of other secondary metabolites
00940 Phenylpropanoid biosynthesis
120674916
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GFIT
Motif
Pfam:
Hydrolase_4
Abhydrolase_6
Abhydrolase_1
Abhydrolase_11
Esterase
Abhydrolase_3
DLH
FSH1
Motif
Other DBs
NCBI-GeneID:
120674916
NCBI-ProteinID:
XP_039811948
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Position
5N:complement(51997018..52002027)
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AA seq
532 aa
AA seq
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MEKCGSGAVQVRQDDEKMAGTDQTRQGVGVGVHHCRTGEKRSRTSENCMEQLNFVKFGSF
SVSSTLVGLQRCGFKPSKSNKPPQAGVPSGGVGNSPDKDTDRHQPAHRARQRHAKNSLSS
RAPPLTCARATATAPIDRPAEQRSRQGSSSPSLPPHMAAISHPGPRGAAAALPRPLGRRA
AVIAAAAAKGAHRARALEGASDELRAAAAQCLDWAPGRRRVRAAFAPVLPTLDHYLFKMA
PKGIQMEENYETNSKGVEIFWKSWLPREGTATKAALFFCHGYGDTCTFFFEGIAKRIAAA
GYAVYAMDYPGFGLSYGLHGYIASFDGMVDHVIEQYARIRGMKEVRELPHFLLGQSMGGA
VALKIHLKQQKEWDGVLLVAPMCKISEDVTPPAPVLKALSILSCLLPEAKLFPQKDIGDL
AFRDPRKRKVAEYNAISYSDQMRLRTAVELLKATNDIESQLEEISSPLLILHGGADMVTD
PQVSKFLYEKASTKDKTLKLYDGSYHSILEGEPDDRISTAINDIISWLDSHC
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atggagaagtgtggaagtggtgctgtccaggtgcgccaagacgatgagaagatggcgggc
actgatcaaaccagacaaggagttggagttggagttcatcattgtcgaactggagaaaag
aggagcagaaccagcgagaattgcatggagcagctcaacttcgtcaagtttgggagcttc
tcggtctcctcgacgctggttggcctccagaggtgcgggttcaaaccgtcaaagtcaaac
aagcctccccaagccggcgtcccgagcggcggagtgggcaactccccagacaaggacaca
gacaggcaccaacctgcccaccgcgcccggcaacgccacgcgaaaaattccctctcaagc
agagcgccccccctcacgtgcgcccgtgccactgccacagctccgatcgacaggccagcc
gagcagcggagcaggcaaggctcttcctccccctcgctgcctcctcacatggcggcgatc
tcgcaccccggcccgcgcggcgccgcggcggcgctgcctcgcccgttggggaggcgcgcc
gccgtgatcgcggccgccgcggccaagggcgcgcaccgggcgcgtgcgctggagggcgcg
agcgacgagctgcgggccgccgcggcgcagtgcctggactgggcccccgggcggcgccgt
gtgcgggccgccttcgcgcccgtgctccccaccctcgaccactacctcttcaagatggct
cccaagggaattcagatggaagagaattatgagactaattcaaagggagttgaaatattc
tggaagagctggctgccaagagagggcactgccaccaaggctgcacttttcttctgccat
ggatatggggatacatgcactttcttttttgaaggtattgctaagaggattgctgctgct
ggatatgccgtttatgctatggattatcctggttttggtttgtcatatggtctgcatggc
tacattgcaagctttgatggaatggtggaccatgtcattgaacagtatgcacgaataaga
ggcatgaaggaagtgcgtgagctgccacactttctcttgggacagtcaatgggaggtgca
gtggccctgaaaatacacttgaagcaacaaaaagaatgggatggtgtgcttcttgtcgcg
cccatgtgcaaaatttcagaagatgtaacaccaccggcaccagttttgaaggcgctgagc
atattgtcatgtcttcttcctgaagcaaagttatttccgcagaaagatataggagatttg
gcatttagagatccaaggaaaagaaaagtagctgagtacaatgccatatcatattctgac
caaatgagattaagaacagcagttgaacttttgaaggccactaacgacattgaatcacag
ttggaggagatctcctccccgttgctgattcttcatggaggcgcagacatggtaacagat
cctcaagtaagcaaattcctctatgagaaagctagcaccaaagacaagaccctcaagctc
tatgacggtagttaccactcgatcttagagggagagccagacgacaggatttcaaccgca
attaacgacatcatttcctggctggattcacattgttga
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