Panicum virgatum (switchgrass): 120674945
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Entry
120674945 CDS
T07260
Name
(RefSeq) aspartyl protease family protein 2-like
KO
K22683
aspartyl protease family protein [EC:3.4.23.-]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pvir01002
]
120674945
Peptidases and inhibitors [BR:
pvir01002
]
Aspartic peptidases
Family A1: pepsin family
120674945
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Paralog
GFIT
Motif
Pfam:
TAXi_N
TAXi_C
Asp
Motif
Other DBs
NCBI-GeneID:
120674945
NCBI-ProteinID:
XP_039811976
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All DBs
Position
5N:complement(54579132..54581027)
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AA seq
467 aa
AA seq
DB search
MRLHTPPAGVPSWRCAAYCSPSSSSPSAPAPPNHQERSSLQVPVVHRDAVFPPAPGAPPG
GLLRLRHGADAGHYTVQLASLHPTAAADDDDRLRSPVLSGLPFDSGEYFAVIGVGDPSTR
ALVVIDTGSDLIWLQCAPCRHCYRQMTPLYDPRSSSAYRRIPCASHRCRRDVLRYPGCDA
RTGGCVYMVMYGDGSASSGDLATDRLVFPSDTHVHNVTLGCGHDNRGLFESAAGLLGVGR
GNLSFPTQVAAAYGRVFSYCLGDRMSRAKDSSSYLVFSRTPELPSTAFTPLRTNRRRPSL
YYVDMVGFSVGGEPVTGFSKASLALDPATGRGGIVVNSGTAISRFARDAYAAVRDAFNSR
AAAGGMRKLDTNFSVFDACYDLRGRGHATVRVPSIVLHFAGGMDMALPPANYLVPVEGSD
RRTYFCLGLQAADDGLNVLGNVQQQGFGVVFDVELERIGFAPNGCSA
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgagattgcatacacctcccgccggcgtgccctcatggcgttgcgcagcctactgctcc
ccctcctcctcgtctccttcagcgccagcgccacccaaccaccaagaacgctccagcctc
caagtccccgtcgtccaccgcgacgcggtcttcccgcccgcgcccggcgccccgccgggt
ggcctcctccgcctccgccacggagccgacgccggccactacaccgtgcagctggcgtcc
ctccacccgaccgccgccgccgacgacgacgaccggctccgctcccccgttctctcgggc
ctccctttcgacagcggcgagtacttcgcggtcatcggcgtcggcgacccgtccacgcga
gcgctcgtcgtcatcgacaccggcagcgacctcatctggctccagtgcgcgccctgccgc
cactgctaccgccagatgaccccgctctacgacccgcggagctccagcgcgtaccggcgg
atcccctgcgcctcgcatcggtgccgccgcgacgtcctccggtaccccggctgcgacgcc
cgcaccgggggctgcgtgtatatggtcatgtacggcgacggctccgcctccagcggcgac
ctcgccaccgacaggctcgtcttccccagcgacacgcacgtccacaacgtcacgctcggg
tgcggccacgacaacagggggctgttcgagtcggcggccgggctgctcggcgtcggccgg
ggcaatctgtccttcccgacgcaggtggcggcggcctacgggcgcgtcttctcctactgc
ctcggcgaccgcatgtcccgcgcgaaggatagctcctcctacctcgtgttcagccgcacg
ccggagcttccgtccacggcgttcaccccgctgcggacgaaccggcggcggccgagcctc
tactacgtggacatggtcggcttcagcgtcggcggcgagcctgtcaccggattctccaag
gccagcctcgcgctggacccggcgaccgggcgcggcggcatcgtggtcaactccggcacg
gccatttcgcggttcgcccgggacgcgtacgcggcggtgcgcgacgccttcaactcgcgc
gcggcggcgggcgggatgcggaagctggacaccaacttctcggtgttcgacgcgtgctac
gacctccgagggagaggccacgcgacggtccgcgtgcccagcatcgtgctgcacttcgcc
ggcggcatggacatggcgctgcctccggcgaactacctcgtccccgtggagggaagcgat
cgccggacgtacttctgcctggggctccaggcggcggacgacggcctcaacgtgctcggc
aacgtgcagcaacaagggtttggggttgtgttcgatgtggaacttgagaggatcggtttc
gcgccaaacggatgctcagcctga
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