KEGG   Panicum virgatum (switchgrass): 120675169
Entry
120675169         CDS       T07260                                 
Name
(RefSeq) protein farnesyltransferase subunit beta-like
  KO
K05954  protein farnesyltransferase subunit beta [EC:2.5.1.58]
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir00900  Terpenoid backbone biosynthesis
pvir01110  Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09100 Metabolism
  09109 Metabolism of terpenoids and polyketides
   00900 Terpenoid backbone biosynthesis
    120675169
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01006 Prenyltransferases [BR:pvir01006]
    120675169
Enzymes [BR:pvir01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.58  protein farnesyltransferase
     120675169
Prenyltransferases [BR:pvir01006]
 Protein prenylation
  Farnesyltransferase/geranylgeranyltransferase 1
   120675169
SSDB
Motif
Pfam: Prenyltrans
Other DBs
NCBI-GeneID: 120675169
NCBI-ProteinID: XP_039812203
LinkDB
Position
5N:complement(55774395..55778839)
AA seq 295 aa
MKVEARVADIYRILFGAAPNTKSVMLELWRDQHIEYLTHGLRHLGPAFHVLDANRPWLCY
WMVHPLALLDEVLDDDLEDDIVDFLARCQDKDGGYGGGPGQLPHLATTYAAVNTLVTIGS
ERALSSINRDYLYKFMLRMKDESGAFRMHDGGEIDVRASYTAISVASLVNILDVELAKGV
GDYIARCQTYEGGIAGEPHAEAHGGYTFCGLAALILLNEAEKLDLPCLIDWVAFRQGVEC
GFQGRTNKLVDGCYSFWQLSIMQSLDLILYNGATKLAHCSTTLPCNNTSCFVLRF
NT seq 888 nt   +upstreamnt  +downstreamnt
atgaaggtggaggccagggttgccgacatctaccgcatcctcttcggggctgcgcccaac
acgaaatccgtcatgctagagctgtggcgtgatcagcatatcgagtacctgacacatggg
ctgaggcatctcgggccagcctttcatgttctcgatgccaatcgcccatggctgtgctac
tggatggttcatccacttgctttgttggatgaggtacttgatgatgatctcgaggatgat
atcgtggacttcttagctcgatgtcaggataaagatggtggatatggcggtggacctggg
cagttgcctcatctagctacgacttatgctgctgtaaatacacttgtgactatagggagc
gaaagggcactgtcatcaataaatagggattacctgtacaagtttatgcttcggatgaaa
gatgaatcgggtgctttcagaatgcatgatggtggtgaaattgatgttcgggcttcctat
actgctatatcggtggccagccttgtaaacattctcgatgtagaactggcaaaaggtgtt
ggtgattacatagcaagatgtcaaacttatgaaggtggtattgctggggagcctcatgct
gaagctcatggtgggtacacgttctgtggattggctgctttgatcctgcttaatgaggca
gagaaacttgacttgccttgcttgatcgactgggtggcatttcgtcaaggagtggaatgt
ggatttcaaggacgaactaataaattggttgacggttgctactccttttggcagctgtcg
attatgcaaagtttggatttgattttatacaacggagcaaccaaattggcccactgttcc
acaacattgccctgcaacaatacatcctgctttgtgctcaggttctag

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