Panicum virgatum (switchgrass): 120675189
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Entry
120675189 CDS
T07260
Name
(RefSeq) mannan endo-1,4-beta-mannosidase 2-like
KO
K19355
mannan endo-1,4-beta-mannosidase [EC:
3.2.1.78
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00051
Fructose and mannose metabolism
pvir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00051 Fructose and mannose metabolism
120675189
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.78 mannan endo-1,4-beta-mannosidase
120675189
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Gene cluster
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Motif
Pfam:
Cellulase
AP_endonuc_2
Glyco_hydro_cc
Motif
Other DBs
NCBI-GeneID:
120675189
NCBI-ProteinID:
XP_039812228
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Position
5N:complement(56694687..56697324)
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AA seq
452 aa
AA seq
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MAFGGGLAMYHVLGVATCVALLYFTFGAVDLRHISLPSLPGSGASPRAAAVAAPFVERRG
AQLFLEGEPFYPNGWNSYWLMDQAVEPRSRDRVSRMFRAAAEMGLTVCRSWAFNDGAYNA
LQVSPGHFDERVFKALDRVLVEAGRHGVRLILSLANNLEAYGGKTQYVRWAWEEGVGLSA
SNDSFFFDPAIRDYFKVYLKTLLTRKNHLTGVEYRDDPTILAWELMNEPRCTTDLSGDTL
QRWIEEMAVYVKSIDRKHLLTVGAEGFYGPTSPPSKLDVNPGTWKDNNYGSDFIRNAKIP
DIDFASIHLYPDTWLLKQRATAEEKLEFAKRWVASHIEDGDTELGKPVLTTEFGLSKRAQ
GFDPSHRDVLYRAIYDIVYGSAARGGAGAAAFVWQLAPEGMEEYHDDYSVVPSEHPSLRR
LIKEQSCRLAKLRRGAGEEAKRALAACAAGSS
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atggcgttcggcggcggcctggccatgtaccacgtcctcggcgtggccacctgcgtggcg
ctgctctacttcaccttcggcgcggtggacctccgccacatctcgctcccgtccctgccc
ggctccggcgcctccccccgcgcggccgccgtggcggcgcccttcgtggagcggcgcggc
gcgcagctattcctggagggcgagccgttctacccgaacgggtggaactcgtactggctc
atggaccaggccgtggagccgaggtcccgggaccgcgtgtcccgcatgttccgcgccgcc
gccgagatgggcctcaccgtgtgccgctcctgggcattcaacgacggcgcctacaacgcc
ctccaggtctccccaggccacttcgacgagcgcgtcttcaaggcgctggaccgggtgctg
gtggaggccgggcggcacggcgtgcggctgatcctgagcctggcgaacaacctggaggcg
tacggcgggaagacgcagtacgtgcggtgggcgtgggaggagggcgtcggcctctccgcc
tccaacgactccttcttcttcgaccccgccatccgcgactacttcaaggtctacctcaag
acgctgctgacgaggaagaaccacttgacgggggtggagtacagggacgaccccaccatc
ctcgcttgggagctgatgaacgagccccgctgcaccacggacctatccggcgacacgctc
cagcgctggatcgaggagatggcggtgtacgtgaagtccatcgacaggaagcacctgctc
accgtcggcgccgaggggttctacgggccgacgagcccccccagcaagctggacgtcaac
ccggggacctggaaggacaacaactacggctccgacttcatccgcaacgccaagatcccg
gacattgacttcgcctccatccacctctaccccgacacctggctgctgaagcagcgcgcc
acggcggaggagaagctcgagttcgcgaagcggtgggtggcctcccacatcgaggacggg
gacacggagctgggcaagccggtgctcaccaccgagttcgggctgtccaagcgcgcccag
ggcttcgacccctcccaccgcgacgtcctctacagggccatctacgacatcgtctacggg
tcggccgcacggggcggcgcgggcgccgccgccttcgtgtggcagctcgcgccggagggc
atggaggagtaccacgacgactactcggtcgtgcccagcgagcacccgtcgctgcgcagg
ctgatcaaggagcagtcgtgcaggctcgccaagctgaggcgcggcgccggggaggaggcc
aagcgggcgctggcggcgtgcgccgccggctcgtcgtag
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