Panicum virgatum (switchgrass): 120675190
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Entry
120675190 CDS
T07260
Name
(RefSeq) DNA replication licensing factor MCM4
KO
K02212
DNA replication licensing factor MCM4 [EC:
5.6.2.3
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
120675190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pvir03032
]
120675190
Enzymes [BR:
pvir01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
120675190
DNA replication proteins [BR:
pvir03032
]
Eukaryotic type
DNA Replication Initiation Factors
pre-RC (pre-replication complex)
120675190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCM
MCM_OB
MCM_lid
MCM_N
MCM4_WHD
Mg_chelatase
AAA_5
AAA_3
AAA
AAA_16
Motif
Other DBs
NCBI-GeneID:
120675190
NCBI-ProteinID:
XP_039812229
LinkDB
All DBs
Position
5N:37116457..37121723
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AA seq
853 aa
AA seq
DB search
MASNGGGSSPPPASSPDARPSSPLPVTNSSPTQSTRRSGGRRRRGSASPYASSPSLGGFE
TPPHPGRRTPSGGGAGAARQQHQNWTGRLPPTPSTPMSTDDIPPSSDAGEDETDGGGAGV
DATPVFVWGTNISVQDVNAAILRFLRHFRDPRDAGRVDPVMDEGKYMRAIHRILELQGAE
SLDVDAHDVFDHDPDLYSKMVRYPLEVLAIFDIVLMDLVARIEPLFEKHIQTRIYNLKSS
ICLRNLNPSDIEKMVSIKGMIIRCSSVIPELKEAVFRCLVCGFYSEPVMVDRGRVTEPHI
CQKEQCKATNSMTLVHNRCRFADKQIIKLQETPDEIPEGGTPHTVSVLMHDKLVDAGKPG
DRVEITGIYRAMSIRVGPAQRTVKSIFKTYIDCLHIKKTDKSRLHVEDTNTMDIDNADAN
KSTEEDFLSDKVEKLKELSKLPDIYDRLTRSLAPNIWELDDVKKGLLCQLFGGNPLRLPS
GASFRGDINILLVGDPGTSKSQLLQYMHKLSPRGIYTSGRGSSAVGLTAYVTKDPETGET
VLESGALVLSDKGVCCIDEFDKMSDNARSMLHEVMEQQTVSIAKAGIIASLNARTSVLAC
ANPTESRYNPRLSVIDNIHLAPTLLSRFDLIYLILDKADEQTDRRLAKHIVSLHFENPIL
EELEVLDLPTLVAYISYARKYIQPQLSDEAAEELTRGYVEMRKRGNSPGSRKKVITATAR
QIESLIRLSEALARMRFSEVVEVRDVVEAFRLLEVAMQQSATDHATGTIDMDLIMTGISA
SERQRRENLVAATRNLIMEKMQLGGPSMRMTELLEEMRKQSSMEIHLHDLRSALGTLMTE
GAVVIHGDNVKRV
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctaatggcggcggtagctccccacctcccgcgtcgtcgccggatgctcgcccg
tcgagcccgctgccggtcaccaactcctcccctacccaatccacgcgccggtccggcggg
cgccgccgccgtgggtccgccagcccctatgcctcgtccccttccctcgggggtttcgag
acgccgccgcaccccggacgccggactccgtcaggcggcggagccggtgccgcccggcag
cagcaccagaactggactggccggttgccgccgacgccctccacccccatgtccaccgac
gacatcccgccgtcctccgacgccggagaggacgagactgacgggggcggcgcgggcgtc
gacgccaccccagtcttcgtctggggcaccaacatcagcgtgcaggacgtcaacgccgcc
atcctccggttcctgcgccactttcgggacccacgcgacgccggccgggtcgaccctgtg
atggacgagggcaagtacatgcgcgccatccaccgcatcctcgagctccagggcgcggag
tccctcgacgtcgacgcgcacgacgtcttcgaccacgacccggacctctacagcaagatg
gtgcgctacccgctcgaggtgttagccattttcgacatcgtactcatggacctcgtcgca
cgcatcgagccactcttcgagaagcacatccagaccaggatctacaacctaaagtcgtca
atttgcttgaggaatcttaatccatctgatattgagaagatggtgtcaataaagggtatg
ataattagatgcagctcggtcataccagagctcaaggaagctgtgttccgctgcctagtt
tgtggtttctactcagagcccgttatggttgatagagggagagtaactgaaccacatatt
tgccagaaagaacaatgtaaagccacaaattctatgaccctagtgcacaacagatgcaga
tttgcagacaaacagatcataaagttgcaagaaacaccagatgagataccagaaggtggc
accccacatacagttagtgtcctgatgcatgataagcttgtcgatgctggaaagcctgga
gatagggttgagatcactggaatatacagggcaatgagtattagagttggacctgctcag
aggacagtgaagtctatattcaagacgtatattgattgccttcacataaagaagacagac
aagtctaggcttcatgtggaggacactaacaccatggatattgacaatgctgatgcaaac
aagtctactgaagaggacttccttagtgataaggttgagaaactaaaagagctttcaaag
ttgcctgatatctatgatagattgactaggtcattggctccgaacatatgggagttggat
gatgttaaaaaaggcctcctttgccagctttttggtggcaatcccttaaggcttccttct
ggggctagcttccgtggtgacataaatattttacttgtgggtgatcctggaacaagtaaa
tcccagcttctccaatacatgcataaactgtctcctcggggaatctatacaagtggtaga
ggaagttctgctgttggtcttactgcttatgttacgaaagatcctgagactggtgaaact
gttcttgagagtggagcactagttttaagtgacaaaggtgtttgctgtatagatgagttc
gataagatgtctgataatgcccgaagcatgctacatgaggtgatggaacagcagacagta
tccattgcgaaggctggaataattgcatctttaaatgctcgaacatctgtcctggcatgc
gcaaatcctaccgaatcacgctacaatccgagactttctgtaattgacaacatccatctt
gccccaacacttctttcaaggtttgacctgatttatcttatcttggacaaggcagatgag
caaactgataggcgcctggcaaagcatattgtttcactgcattttgagaacccaatttta
gaagagcttgaggttttggatttgcccacattagttgcctacataagctatgcaaggaag
tatattcagccacagttatctgatgaagctgcagaagaattgactcgtggctatgttgag
atgaggaaaagagggaatagccctggaagcagaaagaaggttataactgcaactgccaga
caaatagagagcttgattcgtctcagtgaagcattggcccgaatgcgattctctgaagtg
gttgaagtgcgagatgttgttgaggccttcaggcttctcgaagttgccatgcagcagtct
gcaacggatcatgcaacagggacgattgatatggatctaatcatgacgggaatatctgcg
agtgaaaggcagagacgggagaacctcgttgcagcaacccgcaaccttatcatggagaaa
atgcagcttggaggcccctcaatgcgtatgactgagttgctggaagaaatgaggaagcag
agctctatggaaattcatctgcacgatcttcgcagtgctcttggtactctgatgactgaa
ggagctgtggttatccatggcgacaatgtgaagagggtttga
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