Panicum virgatum (switchgrass): 120675207
Help
Entry
120675207 CDS
T07260
Name
(RefSeq) 1,4-dihydroxy-2-naphthoyl-CoA synthase, peroxisomal-like
KO
K01661
naphthoate synthase [EC:
4.1.3.36
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00130
Ubiquinone and other terpenoid-quinone biosynthesis
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
pvir01240
Biosynthesis of cofactors
Module
pvir_M00932
Phylloquinone biosynthesis, chorismate (+ phytyl-PP) => phylloquinol
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
120675207
Enzymes [BR:
pvir01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.36 1,4-dihydroxy-2-naphthoyl-CoA synthase
120675207
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ECH_1
ECH_2
SDH_protease
Carboxyl_trans
Peptidase_S49
Motif
Other DBs
NCBI-GeneID:
120675207
NCBI-ProteinID:
XP_039812248
LinkDB
All DBs
Position
5N:complement(50101959..50104833)
Genome browser
AA seq
339 aa
AA seq
DB search
MDAAERRLARVAAHLAPSSFPVTHAAAPPLVPAPTAASSSSSSSSPAGDSYRRVHGEVSA
EPPEWRAATDESGKEFVDIIYEKAVNEGIAKITINRPDRRNAFRPLTVKELMRAFNDARD
DSSIGVIILTGKGTKAFCSGGDQALRDSDGYVDFDSFGRLNVLDLQVQIRRLPKPVIAMV
AGYAVGGGHVLHMVCDITIAADNAIFGQTGPKVGSFDAGYGSSIMSRLVGPKRAREMWFL
SRFYTADEADKMGLVNTVVPLAELERETVKWCRQILRNSPMAIRVLKSALNAADDGHAGL
QELGGNATLIFYGTEEAKEGKNAYMERRRPDFSKFPRKP
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atggacgccgcggagaggaggctcgcccgcgtcgccgcccacctcgcgccgtcgtcgttc
ccggtcacgcacgccgccgcgcccccgctcgtgcctgctcccaccgcggcgtcctcgtca
tcctcctcgtcgtcgcccgcgggggacagctacaggcgcgtgcacggcgaggtgtcggcg
gagcccccggaatggcgcgcggcgacggacgagtccggcaaggagttcgtcgacatcatc
tacgagaaggccgtcaatgagggcatcgccaagatcaccataaaccgcccggataggagg
aacgcgttccgcccgttgaccgtgaaggagctcatgcgcgcgttcaacgatgccagagac
gacagttcgattggagtcatcattctaacagggaagggaactaaggccttctgtagcggt
ggtgaccaggcgttaagagattctgatggatatgttgacttcgatagctttggccgcctc
aacgttctggacctccaggtgcaaatccgccgtcttccaaagcctgttattgccatggtt
gctggttatgctgttggtggtgggcatgttttgcatatggtgtgtgacataacaatcgca
gcagacaacgcaatatttgggcagacaggacccaaggttggaagctttgatgctggctat
ggatcttcaataatgtcccgattggttggaccgaagagagcgcgtgagatgtggtttctg
tcacggttctacaccgctgatgaagctgacaaaatgggacttgtgaacactgtagtgccg
cttgctgaattggagcgagaaaccgtgaaatggtgccggcaaatcttaaggaacagcccc
atggccattcgagttctgaaatctgcactcaacgcagcagatgacggccatgcaggtctt
caggagcttggcggtaatgccacgctgatattctacggcacggaagaggcaaaggaaggg
aagaacgcgtacatggagaggcggcgcccggatttctccaagttcccacggaaaccttga
DBGET
integrated database retrieval system
