Panicum virgatum (switchgrass): 120675232
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Entry
120675232 CDS
T07260
Name
(RefSeq) probable beta-1,4-xylosyltransferase IRX9L
KO
K20869
putative beta-1,4-xylosyltransferase IRX9 [EC:2.4.2.-]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pvir01003
]
120675232
Glycosyltransferases [BR:
pvir01003
]
Polysaccharide
Structural polysaccharide
120675232
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GFIT
Motif
Pfam:
Glyco_transf_43
Motif
Other DBs
NCBI-GeneID:
120675232
NCBI-ProteinID:
XP_039812280
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Position
5N:complement(51207315..51211148)
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AA seq
446 aa
AA seq
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MARRNAGAMPREGSAGSVKDWSEFDPSPSPKLAYSHSYVAMRGLLTSVASLDPILMSSSL
KSLWAALSSHKHARSLERPKSKGVNWRRPMVHLLVCFLVGIFIGFTPPFSVDLSDKIDSE
NDMFPFDGDVVDRQMLELKSTKLEPFAAETEAVEEQQVDESPPVPAMLDDEVDFIEASHI
VPSVNDSDFVVRKQLIIVTATSVRPHQAYYLNRLAHVLKNVPPPLLWIVAEWPYQSRETA
EILRSSGVLYRHLICNRNTTNIRKIIVCQKNNAIFHIKKHRLDGIVHFADEERAYSVDLF
EEMRKIRRFGTWPVAIHVGARYRVVLEGPLCRGNQVTGWHTNQRRGVPRRFPIGFSGFAF
NSTILWDPQRWNSPTLESIILHSGGRGGLQESRFIEKLVEDETQMEGLADNCSRVMVWNF
DLEPPQLHYPTGWLLQKNLDAVVPIT
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggcccgaaggaatgccggcgcaatgccgcgggaggggtcggcggggtcagtgaaggac
tggtcggaattcgacccctcgccgtcccccaagctggcgtactcgcattcctacgtcgcg
atgagggggctgttgacgtcggtggcctctctggaccctatcctgatgtcaagcagcctc
aagtctttgtgggcagctttgtcgtctcacaagcacgctcggtccttggagaggccgaag
tccaaaggggtgaactggaggaggcccatggtccatctgcttgtgtgcttcttggtggga
attttcattggattcacaccacccttctctgttgatttatcggataagatagactctgaa
aatgatatgtttccgtttgacggagatgtggttgacagacaaatgctggaacttaagagt
acaaagttggaaccgtttgcggcagagaccgaagcagtcgaagaacaacaggttgatgag
agtcctccagttcctgcgatgttggatgatgaggtggacttcattgaagcctctcatatc
gtaccttctgttaatgactctgactttgttgtgaggaagcagctgataattgtgacagca
acttctgttcgcccacaccaggcgtattacttgaatcgtctggcacatgtgttaaaaaat
gtgccacctcctcttctgtggattgtggcggagtggccatatcagtcccgtgaaacagcg
gagatcctgaggtcttctggggttctgtacagacatctcatctgcaaccggaacaccacg
aacataagaaagattattgtttgccaaaagaacaatgcaatttttcatataaagaagcac
cgcttagatggtatagtccattttgctgatgaggagcgagcatactcggttgatttattt
gaagagatgcggaaaatcaggcgatttggtacatggccagtagcaatacatgttggggcc
aggtatagggtggttttagaagggcccctttgtaggggtaatcaagtcactggatggcat
acaaatcagagaaggggtgtacctcgtcggtttccaattggtttctctgggtttgctttc
aacagcactatactttgggatccccagagatggaacagccccactttagagtctattata
ctccattcaggtggcagaggtggcttgcaggagtcacgattcatcgagaagctcgtggag
gatgagactcaaatggaaggcctcgcggacaactgcagtcgggtcatggtctggaatttc
gacttggagcctccccagctccactaccctactggctggctgctgcagaagaacctagat
gccgtcgtgcctataacctaa
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