Panicum virgatum (switchgrass): 120675252
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Entry
120675252 CDS
T07260
Name
(RefSeq) transcription factor-like protein DPB
KO
K04683
transcription factor Dp-1
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
120675252
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120675252
03036 Chromosome and associated proteins [BR:
pvir03036
]
120675252
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Helix-turn-helix
Fork head/winged helix cell cycle-controlling factors, DP
120675252
Chromosome and associated proteins [BR:
pvir03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
120675252
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DP
E2F_TDP
DUF7795
ATP-synt_ab_C
Motif
Other DBs
NCBI-GeneID:
120675252
NCBI-ProteinID:
XP_039812300
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Position
5N:complement(51509417..51513364)
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AA seq
253 aa
AA seq
DB search
MAPPCGDAAAAPELTSLRIPDGAGLPPLPRRGGGGGGNAAEREEEGDKSARKEKAGAQRI
AGWGLREYSKIVSKKVETKGRTTYNEVADEICAELKLTLNGQEFDEKNIKRRVNDAFNVL
IALRVIAKDKKEIKWVGLSNFRYEKIKKLEEAHKELMTRIKNKKKLLQEIEKQFDDLQNI
KFRNQVLQRPAESANGICLPFLLVKASRKARVEIEISEDSKFAGFDFNCAPFTLHDDVSI
LDGIRRNSIRRAG
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atggcgcccccctgcggcgatgctgcggcggcacccgagctgaccagcctgcgcatcccc
gatggagccgggttacctccgcttcccagacgcggcggcggcgggggcggcaatgcggcc
gagagggaggaggagggcgataagagcgcgaggaaggagaaggccggggcgcagcggatc
gccgggtgggggctccgcgagtacagcaagatagtttctaaaaaagttgagaccaaagga
cggactacttataatgaggttgcagatgaaatttgtgcggagctaaagttgacgcttaat
ggtcaagagtttgatgagaagaatattaagaggagagtgaatgatgcttttaatgtgcta
attgcactacgtgttattgcaaaagacaaaaaggaaataaagtgggtgggcctttctaat
ttcagatatgaaaagattaagaagttagaggaggctcacaaagaactcatgaccaggatt
aagaacaagaagaaacttctccaggaaattgaaaaacagtttgatgacctccagaacatc
aagtttcgcaaccaggtactacagaggccagcagagagtgcgaatggtatctgccttcca
ttcttattggtcaaggcatccagaaaagcaagggtggaaattgagatttcagaggactca
aagttcgcaggtttcgatttcaactgtgcaccattcaccttgcatgatgatgtctcaatc
cttgatgggatcaggcgcaatagcataagaagagctgggtag
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