Panicum virgatum (switchgrass): 120675262
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Entry
120675262 CDS
T07260
Name
(RefSeq) transcription initiation factor TFIID subunit 11-like
KO
K03135
transcription initiation factor TFIID subunit 11
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
120675262
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pvir03021
]
120675262
Transcription machinery [BR:
pvir03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
120675262
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAFII28
RPN2_C
T3SS_basalb_I
Motif
Other DBs
NCBI-GeneID:
120675262
NCBI-ProteinID:
XP_039812312
LinkDB
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Position
5N:51603217..51607076
Genome browser
AA seq
208 aa
AA seq
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MKDPFEAAVEEQDSPPESPAPPEEEAGAAGPADDPDDYDGGGPRAPPPRQPPAPASLAAA
AAKAKGRVQREQQEDEDDEEDQMEVDLEKLPTSTGDPDKLAKMNAILSQFTEEQMNRYES
FRRSGFQKSNMKRLLASITGSQKISIPTSIVVSGIAKMFVGELIETARIVMTERKDSGPI
RPCHIREAYRRLKLEGKIPRRSVPRLFR
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaccccttcgaggcggccgtcgaggagcaggactcgccgccggagtcgccggcg
ccgccagaggaggaggccggcgcggcgggccccgcggacgaccccgacgactacgacggc
ggcggcccgcgcgccccgccgccgcggcagccgccggccccggcgtcgctcgccgctgcc
gcggccaaggccaagggccgggtacagagggagcagcaggaggatgaggacgatgaggag
gaccagatggaggtcgacctcgagaagctccccaccagcaccggcgaccccgacaagctc
gccaagatgaatgctatactgtcccaatttacggaagagcagatgaaccgttatgagtca
ttccgaagatcaggatttcaaaaatcaaacatgaaaaggctattggcaagcatcactgga
agccaaaagatttctatccctacgtcaattgtggtatcagggatagcaaaaatgtttgtt
ggagagctaattgaaacagccaggatagtgatgactgagaggaaggattctggaccgatt
aggccttgccacatcagggaagcatacagaagactgaagcttgaagggaagataccacga
cgatctgttcctaggcttttccgttag
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integrated database retrieval system
