Panicum virgatum (switchgrass): 120675283
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Entry
120675283 CDS
T07260
Name
(RefSeq) protein DETOXIFICATION 14-like
KO
K03327
MATE family, multidrug and toxin extrusion protein
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvir02000
]
120675283
Transporters [BR:
pvir02000
]
Solute carrier family (SLC)
SLC47: Multidrug and Toxin Extrusion (MATE) family
120675283
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Gene cluster
GFIT
Motif
Pfam:
MatE
Motif
Other DBs
NCBI-GeneID:
120675283
NCBI-ProteinID:
XP_039812343
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Position
5N:complement(51842213..51845891)
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AA seq
489 aa
AA seq
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MAAATTEGGEAALLLLLPAGDDGKESAASRWRLWAREARRVGYLALPMVVVAMSQYVVQV
SSNMMVGHLPGVLPLSSTAIATSLANVTGFSLLIGMASALETLCGQAYGAKQYHKLGVDT
YRAVFTLLAVCIPLSLIWVFMDKILILIGQDPLISHGAGRYMIWLIPGLFSNAVLQPVTK
FLQTQSLIFPLLLSSVATMAIHIPLCYVMVFKTGFGYTGAALTIGVSYWLNVAMLVVYIM
LSSSCKETRTRPTMEAFKGVGAFLRLALPSALMICLEWWSFEILILLSGFLTNPELQTSV
LSICLTSVTLLFTIPFGLGAAGSTRVANELGAGNADGARSAVRVVLSMAALDAVIVGGTL
LAARRLVGLAYSSEEEVVSSVAAMVPLVCITVVTDCVQGALSGVARGCGWQHLGAYVNLG
SFYLLGIPMAILLGFALHMGTRGLWLGVVCGSLSQSALLSAINFFTDWPKMAEKARERVF
SEKAPEPGP
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgcgacgacggagggcggcgaggccgcgctgctgctgctgctgccggcgggc
gacgacggcaaggagtcggcggcgtcccggtggcggctgtgggcgcgcgaggcccggcgg
gtggggtacctggcgctgcccatggtggtggtggccatgtcgcagtacgtcgtgcaggtg
tcctccaacatgatggtcggccacctccccggcgtcctcccgctctcctccacggccatc
gccacctccctcgccaacgtcaccgggttcagcctcctgattggaatggcaagtgcactg
gagacactatgtggccaagcctacggtgcaaaacagtaccataaactaggggtcgacact
tacagagcagtatttaccctcctagcagtctgcatcccgctctcactcatctgggtgttc
atggacaagatcctgatcctcataggacaggaccccctcatctcccacggagctggaagg
tacatgatctggctgatcccggggctcttctccaacgcggtgctccagccggtgaccaag
ttcctgcagacgcagagcctgatcttcccgctgctgctgtcgtccgtcgcgaccatggcg
atccacatccctctgtgctacgtcatggtgttcaagaccggcttcgggtacaccggcgcc
gctctgacgataggcgtatcctactggctcaacgtggccatgcttgtcgtgtacataatg
ctctcgagttcctgcaaggagacgcgcacacgccccacgatggaagccttcaagggagtg
ggcgcgttcctgcgtctagctctgccgtcggcactcatgatctgtctggaatggtggtcg
ttcgagatccttattctcttgtcaggatttctaaccaacccagagctgcagacctcagtg
ctttcgatctgcctcacaagtgtaacactgctcttcactataccatttgggcttggagct
gctgggagcacacgggtggcgaacgaactgggcgccgggaacgctgacggagctcgatcc
gctgtccgcgtcgtgctctccatggcggcgttggacgcggtcatcgtgggcgggaccctc
ctagcggcgcggcgcctcgtgggcctcgcgtacagcagcgaggaggaggtcgtctcttcc
gtcgccgccatggtccccctggtctgcatcactgtcgtcaccgactgcgtgcaaggagcg
ctctcaggcgtcgcccgggggtgcgggtggcagcacctgggcgcgtacgtcaacctcggc
tccttctacctgctggggatccccatggcgatcctcctcggcttcgcgctgcacatgggg
acgagagggctctggttgggcgtcgtctgcggctccctgtcgcagtccgcgctcctgtcc
gccatcaacttcttcaccgactggcccaagatggctgagaaggctagggaacgggtgttc
agcgagaaggctcccgagcccgggccgtga
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