KEGG   Panicum virgatum (switchgrass): 120675302
Entry
120675302         CDS       T07260                                 
Name
(RefSeq) glycine dehydrogenase (decarboxylating) 2, mitochondrial-like
  KO
K00281  glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir00260  Glycine, serine and threonine metabolism
pvir00630  Glyoxylate and dicarboxylate metabolism
pvir00670  One carbon pool by folate
pvir00785  Lipoic acid metabolism
pvir01100  Metabolic pathways
pvir01110  Biosynthesis of secondary metabolites
pvir01200  Carbon metabolism
Module
pvir_M00532  Photorespiration
pvir_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    120675302
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    120675302
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    120675302
   00670 One carbon pool by folate
    120675302
Enzymes [BR:pvir01000]
 1. Oxidoreductases
  1.4  Acting on the CH-NH2 group of donors
   1.4.4  With a disulfide as acceptor
    1.4.4.2  glycine dehydrogenase (aminomethyl-transferring)
     120675302
SSDB
Motif
Pfam: GDC-P GcvP2_C Beta_elim_lyase
Other DBs
NCBI-GeneID: 120675302
NCBI-ProteinID: XP_039812378
LinkDB
Position
5N:53696157..53705513
AA seq 1031 aa
MERARRLASRALLRRLLAAAGSTTPPVPSRGISTLAPAPAGKQRPRARGAHQHAQDRQVS
ASALKPSDTFPRRHNSATPTEQAAMASACGFSTVDALIDATVPAAIRAPPMHFAGKFDQG
FTESQMIDHMQRLASMNKAYKSFLGMGYYGTHVPAVILRNLMENPAWYTQYTPYQAEIAQ
GRLESLLNFQTMVADLTGLPMSNASLLDEATAAAEAMAMCLGIVRGKKKTFLIASNCHPQ
TIDVCQTRAAGFDIKVVVADAKDFDYSSGDVCGVLVQYPGTEGEVLDYAEFVKDAHAHGV
KVVMATDLLALTTLRPPGEIGADIAVGSAQRFGVPMGYGGPHAAFLATSQEYKRLMPGRI
IGVSVDSTGKPALRMAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPAGLKAIA
DRVHGLAATFAHGLKKLGTVTVQDLPFFDTVKVTCPDASAIAKEAVENEMNLWVVDANTI
TVAFDETTTLEDVDKLFKVFNNGKPASFTAESLAPEVSSSIPSSLARESPYLTHPIFNMY
HTEHELLRYLHKLQSKDLSLCHSMIPLGSCTMKLNATAEMMPVTYPNFANLHPFAPTDQA
AGYHEMFADLGDLLCKITGFDSFSLQPNAGAAGEYAGLMVIRAYHKSRGDHHRDVCIIPV
SAHGTNPASAAMVGMKIVAVGTDSKGNINIEELRKAAEANKDNLSALMVTYPSTHGVYEE
GIDEICRIIHDNGGQVYMDGANMNAQVGLTSPGFIGADVCHLNLHKTFCIPHGGGGPGMG
PIGVKKHLAPFLPSHPVIPTGGFPLPEKTDPLGTISAAPWGSALILPISYTYIAMMGSQG
LTDASKIAILNANYMAKRLEKHYPVLFRGVNGTVAHEFIIDLRGFKATAGIEPEDVAKRL
MDYGFHAPTMSWPVPGTLMIEPTESESKAELDRFCDALISIREEIAEIENGKADTLNNVL
KGAPHPPQLLMSDTWTKPYSREYAAFPAAWLRGAKFWPTTGRVDNVYGDRNLICTLQQAS
QVAEEAAAATA
NT seq 3096 nt   +upstreamnt  +downstreamnt
atggagcgcgcacgccgcctcgcaagccgcgcgctgctgcgccgcctgctggcggcggcc
gggtccaccacgcccccggtcccgtcccgcggcatctccaccctggcgcccgcgccggcg
gggaagcagcgcccgcgcgcgcggggcgcgcaccagcacgcgcaggaccggcaggtgtcg
gcgtcagcgctgaagccgagcgacaccttcccgcggaggcacaactccgccacgcccacc
gagcaggccgccatggcgtccgcctgcgggttcagcaccgtcgacgcgctcatcgacgcc
accgtcccggccgccatccgcgcgccgccgatgcacttcgccggcaagttcgaccaaggg
ttcaccgagtcccagatgatcgaccacatgcagcgcctcgcgtccatgaacaaggcctac
aagtccttcctcgggatgggctactacggcacccacgtcccggcggtgatactgcgcaac
ctcatggagaaccctgcctggtacacccagtacacgccgtaccaggccgagatcgcgcag
ggccgcctcgagtccctgctcaacttccagaccatggtcgcggacctcaccggcctcccc
atgtccaacgcatctttgcttgacgaggccaccgccgctgccgaggccatggctatgtgc
ctcggcatcgtgaggggcaagaagaagaccttcctcatcgcctccaactgccacccgcag
accatcgacgtctgccagacgcgcgccgccgggttcgacatcaaagtcgtcgtcgcggac
gccaaggacttcgactacagcagcggcgacgtgtgcggcgtgctcgtgcagtaccccggc
acggagggcgaggtgctcgactacgccgagttcgtcaaggacgcgcacgcccacggcgtc
aaggtggtcatggccaccgacctgctcgcgctcaccacgctgcgcccgcccggcgagatt
ggcgccgacatcgccgtgggctccgcccaacggttcggcgtgcccatgggttacggaggc
ccgcacgccgcgttcctcgccacgtcgcaggagtacaagcggctcatgcccggccgtatc
atcggagttagcgtcgattccaccgggaagcccgcgcttcgcatggcgatgcagacccgg
gagcagcacatccgccgggacaaggccaccagcaacatctgcactgcccaggccttgctc
gccaacatggctgccatgtatgctgtctaccatggtcctgcggggctgaaagcgatcgct
gaccgggttcatggcctggctgctaccttcgcccatgggctgaagaagctcgggacagtg
acggtgcaggatctgccgttctttgatacagtcaaggtcacgtgtcctgatgcgagtgca
attgccaaggaagctgtcgaaaacgagatgaacctttgggttgtcgatgcgaacacgata
actgtagcgtttgatgagaccaccaccttggaggatgttgacaagctgtttaaggtgttc
aacaatggcaaaccagcgagctttaccgctgaatcccttgcaccagaggtctcaagctca
attcctagcagccttgctcgtgagagcccctacctaacgcatccaatcttcaacatgtac
cacacagagcacgagcttctccgttacctgcataagttgcagtccaaggatctctcactg
tgccacagtatgatccctctcggttcttgcacgatgaaactaaatgctactgctgagatg
atgcctgtcacatatcccaactttgcgaacctgcacccatttgcccctactgatcaggct
gcaggctatcatgaaatgtttgccgacttgggcgatctgttatgcaagatcacaggattt
gattctttctcattgcaaccgaatgctggtgctgcaggagagtatgctggattaatggtt
atccgtgcgtaccacaagtcaagaggagaccaccaccgtgatgtctgcatcattcctgtc
tcagcacacggtacaaatcctgcaagtgctgctatggttggaatgaagattgttgctgtt
ggaactgattccaaaggtaacataaacattgaggaattgaggaaagctgcggaagcaaac
aaggacaacttgtctgctctgatggttacctacccttcaactcacggagtctatgaagaa
ggcattgatgagatatgcaggatcattcatgataatggcgggcaggtgtacatggacgga
gctaacatgaatgctcaggttgggttaacaagtcctggttttattggagctgatgtttgc
caccttaaccttcacaagacattttgcattccacatggtggaggtggtcctggaatggga
cctattggtgttaagaagcacttggcaccatttttaccatctcacccagtgattcccact
ggcggcttcccccttcctgagaaaaccgacccgcttggtacaatttctgctgctccatgg
ggatctgctttaattctgccaatttcctacacatacatagccatgatgggctcacaggga
cttactgatgcttcaaagattgcaatcttgaatgcaaactacatggcaaaacgactagag
aagcactacccagttttgttccgtggagtcaatggaactgttgctcatgaattcatcatc
gatttaagagggtttaaggcgaccgctggtattgagccagaggacgtagctaagcgcttg
atggactatggattccatgcaccaactatgtcatggcctgttccgggcacacttatgatt
gaacccactgaaagtgagagcaaggctgagctagacaggttctgtgatgctcttatctcc
atcagggaagagattgcagagatagaaaatggcaaagcagatacgctcaacaatgtcctg
aagggtgctcctcatccaccccaactcttgatgagtgacacatggactaagccgtattca
agggagtacgctgcattccctgcggcatggctccggggtgccaagttctggccaacaact
ggtcgtgtggacaacgtgtacggggaccgcaacctcatctgcacgctgcagcaggcgtcc
caggtggcggaggaagcagcagccgctactgcgtaa

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