Panicum virgatum (switchgrass): 120675311
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Entry
120675311 CDS
T07260
Name
(RefSeq) chloride channel protein CLC-e-like isoform X1
KO
K03281
chloride channel protein, CIC family
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvir02000
]
120675311
Transporters [BR:
pvir02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
120675311
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Voltage_CLC
CBS
Motif
Other DBs
NCBI-GeneID:
120675311
NCBI-ProteinID:
XP_039812417
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All DBs
Position
5N:53222416..53227514
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AA seq
743 aa
AA seq
DB search
MAPSAATTTSSSARLLLASPQSRPALLGLRGCGRRSTVGLARRGGGCARRLRVVRRGAVD
EEAGANTRGQQQEAAEAEAIEDPAPGRDLVTLAACLVGLLTGVSVVLFNLSVHEIRDIFW
DGIPSRGASWLREEPIGEVWQRVIFVPVSGGVIVGGLNALRSSVKTNSNGPMSKVKGAIR
PLLKAVAASFTLGTGNSLGPEGPSVEIGSSIAKGFGNLFDWEGGKKLSLVAAGSAAGISS
GFNAAVAGCFFAVESVLWPSSTDSSSLANSTPMVILSSVIASVVSEIGLGSDPAFTVPDY
DFRSPTELPLYLLLGVFCGLVSITLSRCTSLTMEAVERLQRATGLPKAASPALGGLIVGL
LALMYPEVLYWGFENVDILLESRPFTSGLSATILVQLIGVKILATSLCRAFGLVGGYYAP
SLFIGAATGMAYGKFMRFTFTGPEALLHIPFLDVASPQAYGLVGMAATLAGVCKVPLTSA
LLLFELTHDYRIVLPLLGAVGLSSWIASPQRFSKSIRSKLDSLEEKSSLAQQENSLPTQN
KQVRYMDTADSSQELCKIESSLCVYDANDENMFENLSVAEVMKTNYFSVSMTTPLVEALD
LMLAEKQPFVMVTENNRSVIGLLALKNIQDFCRAANDTRAQDEVKEFLVSHVYQAGKCKS
CSVTPQMPLTTAEKIMDSYGVDHLPVVSEPANLQDSGLLIGFVDRECITIARRAMAMKEF
FRSTYEIGKDERSSTEGRRYDDT
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atggcgccatccgctgccaccaccaccagctcctccgcgcgcctcctcctcgcctcgccc
cagtcccggcccgctctcctcgggctccgcggctgcggccgccgcagcaccgtggggctg
gcgcgccgaggcggcgggtgcgcgcgccgcctgcgggtcgttcggcgcggcgccgtggac
gaggaggccggggccaacacgcgggggcagcagcaggaggcggcggaggcggaggcaatc
gaggacccggcgcccggccgcgacctcgtaacgctcgccgcctgcctcgtcggcctcctc
actggcgtctccgtcgtgctcttcaacctctcggttcatgaaatacgtgacattttctgg
gatggtattccttcacgaggcgcttcatggctgagggaagaaccgatcggtgaagtctgg
cagagagtgatatttgttccagtcagcggaggtgttatagtaggaggattgaacgcatta
agaagttctgtcaagactaactcaaatggccctatgtccaaggtaaagggtgcaattagg
ccactcttgaaagctgtggcagcatctttcacacttggaactggcaattctttgggtcct
gagggtcccagtgtggagattggttcttcaatagccaaaggatttggaaatttgtttgac
tgggagggtgggaaaaagctatctcttgtggcagctggatcagcagctggaatttcatca
ggttttaatgctgctgttgctgggtgcttttttgcggtggaatctgttttgtggccttct
tctacggattcctcatcccttgccaactcaacaccgatggtgatactcagttcagtgata
gcatctgttgtttcagaaattggtctaggttccgatcccgccttcactgttccagattat
gattttcgctccccaacagaacttcctctatatcttttgctgggtgtcttctgtggattg
gtgtcaatcacattatcaagatgtacatcacttactatggaagcagttgagagattacaa
agggcaacaggattaccaaaggctgcatcgcctgcattaggtggccttattgttggtctc
ctagcactcatgtaccctgaagtattgtattggggctttgaaaatgttgatatcttgctg
gaatcacgaccatttacaagcggcctctctgcgactatactggtccagctcattggagtg
aaaatattagcaacatctttgtgcagagcttttggattggttggtggttactatgcacca
tctctttttattggtgcagccacagggatggcatatggcaagttcatgaggtttacattc
actggtcctgaagcactcttgcatatccctttcctagatgtggcatcacctcaagcatat
ggcctggtgggtatggcagctacccttgctggtgtatgcaaggtgcctctgacatcggcg
ctcctactttttgagcttacacatgactatcgtatagttctacctttgcttggggctgtt
gggttatcatcttggattgcttctcctcaaaggttctctaaaagcattaggagtaagctg
gattctctggaggagaaatcaagtcttgctcaacaggaaaacagcttgcccactcaaaac
aaacaagtcagatacatggatacggctgattcatctcaagaattatgtaaaattgaaagc
tccctttgtgtctatgatgccaatgatgagaatatgttcgagaatctttctgttgcagag
gtcatgaaaactaactatttttcagtctcaatgacaactccattagttgaggcactagat
cttatgcttgcagagaagcagccctttgttatggtcactgagaataaccggtctgtaata
ggcttgctagcactaaaaaatatccaagatttctgccgagctgcaaatgatacaagggca
caagatgaggtaaaggaattcctggtatctcatgtttaccaagcaggcaagtgtaaatca
tgctctgtgactcctcagatgccacttactactgcagagaagattatggattcttatggt
gtggatcaccttcctgtggtctctgaacctgctaatcttcaggacagcggacttttgata
ggttttgtagatagagaatgcatcaccatcgctcgaagagccatggcaatgaaagaattt
ttcagatctacatatgagattggaaaggatgagagatctagcacggaagggaggagatat
gatgatacatga
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