Panicum virgatum (switchgrass): 120675320
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Entry
120675320 CDS
T07260
Name
(RefSeq) anoctamin-like protein Os01g0706700
KO
K19327
anoctamin-10
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pvir04040
]
120675320
Ion channels [BR:
pvir04040
]
Chloride channels
Chloride channel, calcium-activated (CaCC)
120675320
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Gene cluster
GFIT
Motif
Pfam:
Anoctamin
Motif
Other DBs
NCBI-GeneID:
120675320
NCBI-ProteinID:
XP_039812437
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Position
5N:complement(53384932..53389586)
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AA seq
660 aa
AA seq
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MGAGREEGEGAVEEEATGYEVGIVVPKLSRAAAAGAAEDCLARLVRELEGAGLLVERVRG
VPAEFIKLAAPMGTLGRAAAEMQMKKLTYIGMELQFEWDQVAAFVRQPDGSLFSWRERYC
CFRYLIYGIVNKTNSEITLKFDDKEFHWKQNESLLTRLESEGVVKLVFPLHDEIKRKQLL
RNWALNWLDFTWQPIDEIYSYFGTKIATYFAFLGMYTRWLFFPAVFGLATQLIDFGSLQW
LVLPAFFIFVISWAVFFLQFWKRKNSALLARWGINCSLSEYKSMGNELDSLGDALTIEEK
KFSDVSAEKRKLQRNEWFGVLLRIRNNAIIVLAIICLQLPFELAYAHLYEITETEVMRYL
LTAIYLVAIQYYTRIGGKVSVNLIKYENNQGEESSSASLVYKVFGLYFMQSYIGLFYHAS
LYRDILALRQVLIQRLIVSQVLENLIENSIPYLKYSYKKYIAVHKKKHERESPSGKSVRL
STRVEKEYLKPSYTASIGAELEDGLFDDFLELTLQFGMIMMFACAFPLIFCFAALNNATE
IRADALKLLVMLKRPVPRAAATIGAWLNIFQFLVVMAICTNCLLLVCLYDAEGNWRIEPG
LAAILIMEHALLLIKFGFSHFVPEEPAWVKANRVRYVAQAQNVCSKQLLKSISKLDAKLD
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgggggcggggcgagaggaaggggaaggggccgtggaggaggaggccacggggtacgag
gtgggcatcgtggtgcccaagctctcccgcgccgccgcggcgggggccgccgaggactgc
ttggcgcggctggtgcgggagctcgagggcgccgggctgctagtcgagcgcgtccgcggc
gtccccgccgagttcatcaagctggctgcgccaatggggaccctggggagagcggctgcg
gagatgcagatgaagaagctgacctacatcggaatggagcttcagtttgaatgggaccag
gtcgcagcatttgtcaggcagccagatgggtccctgttcagctggagagagcgatattgc
tgcttccgttacttgatatatggcatagtgaacaagacaaactctgaaataactcttaaa
tttgatgacaaggagttccattggaagcaaaatgagtcactattgacaaggctggaatct
gaaggagttgtaaagctagtgttccctttgcatgatgaaattaaaaggaagcaactcctg
agaaattgggcactcaattggcttgacttcacatggcaacctattgatgagatttactcc
tactttggaacgaagattgctacatactttgcgttcctaggaatgtatacacgttggctt
ttcttcccagctgttttcggactggcaactcaacttatagattttgggtcattgcagtgg
ttggttcttcctgctttctttatctttgttatttcttgggcagtcttctttttgcaattt
tggaaacgaaagaattcagcacttcttgcaagatggggtataaattgctcattatctgaa
tacaaaagtatgggcaatgaacttgactccttgggtgatgctcttactattgaggaaaag
aagtttagtgatgtatctgctgagaaaagaaagttgcaaaggaatgaatggtttggtgtc
ctccttagaataaggaacaatgctatcattgtgttggctatcatttgtcttcagctgcca
tttgagttggcatatgctcatctatacgagattacagaaactgaggtgatgaggtatttg
ttgaccgctatatatcttgttgcgattcagtattacaccagaattggtggcaaggtatct
gtcaatttgataaagtatgaaaacaatcaaggagaagagtctagttctgctagcttagtt
tataaggtctttggcctttactttatgcagtcatatattgggttattttaccatgcttca
ttgtatcgtgatatactggccctccggcaagttctcatccagcgtctcattgtgtcccag
gtattagaaaatctgattgagaattccattccttacctgaagtacagctataaaaagtac
atagctgtccacaagaaaaagcatgagagagaatcaccctcaggaaagtcagtccggtta
tcaacaagagtggagaaagaatatttaaaaccctcttatactgcaagcattggagcagaa
cttgaagatggtttatttgatgattttctggagctaactctacagtttggaatgatcatg
atgtttgcgtgtgcatttccgctgattttctgttttgctgctctgaacaatgctactgaa
atcagagcagatgcattgaaattattagtcatgttgaaaaggcctgtcccccgtgctgca
gctacaattggagcatggttgaatatattccagttcttggtggtaatggcaatatgcaca
aactgcttgcttcttgtttgtctctatgatgcggagggaaactggaggattgagccagga
cttgcagcaatcctcataatggagcatgctctcctcttaatcaaattcggtttctcacac
ttcgtgcctgaggagcctgcatgggtgaaagcaaatcgagtgcgatatgtagctcaagca
caaaatgtctgctccaaacaacttttgaagagcatttcaaaattggacgccaaactggac
tga
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