Panicum virgatum (switchgrass): 120675383
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Entry
120675383 CDS
T07260
Name
(RefSeq) myb-related protein Hv33-like
KO
K09422
transcription factor MYB, plant
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120675383
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
120675383
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
HTH_Hrp3
Motif
Other DBs
NCBI-GeneID:
120675383
NCBI-ProteinID:
XP_039812529
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Position
5N:complement(53029151..53031018)
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AA seq
302 aa
AA seq
DB search
MGRHAHAGSAAAAAGVQQKLRKGLWSPEEDDKLYNHIIRYGVGCWSSVPKLAGLQRCGKS
CRLRWINYLRPDLKRGSFSQQEEDAIVGLHEILGNRWSQIASHLPGRTDNEIKNFWNSCL
KKKLRQRGIDPTTHKPISADAAAAAAALDQPASQEHKPPAADAGGFAPKQQHQQVFDPFP
LTDSFGGGFDAAAGAALYGHLGGGGKQDAAAFVDYSSVLDVSENLGYGESSSNSSNWNCA
PEASNALDGGEAAPLHWASGEEQSLEHKFLLPCHGQQEQSLPHFDFDISRGAVVGDFNLE
FF
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atgggacgccacgcccacgcgggctccgccgccgccgccgccggcgtgcagcagaagctg
cgcaagggcctctggtcgcccgaggaggacgacaagctctacaaccacatcatccgctac
ggcgtcggatgctggagctccgtgcccaagctcgcgggcctccagaggtgcggcaagagc
tgccggctgcgctggatcaactacctgcgcccggacctgaagcggggcagcttctcgcag
caggaggaggacgccatcgtcggcctgcacgagatcctgggcaacaggtggtcgcagatc
gcgtcgcacttgccgggccggacggacaacgagatcaagaacttctggaacagctgcctc
aagaagaagctgcgccagcgcggcatcgaccccaccacccacaagcccatctccgccgac
gccgcggcggcggcggcggcattggaccagccggcgtcgcaggaacacaagccgccggcc
gccgacgccggcggcttcgcgccgaagcagcagcaccagcaggtgttcgacccgttcccg
cttaccgacagcttcggcggcggcttcgacgcggccgctggcgccgcgctgtacggccac
ctgggcggcggcggcaagcaggacgcggccgcgttcgtggactacagcagcgtgctggac
gtgtcggagaacctgggctacggcgagagctccagcaacagcagcaactggaactgcgcg
ccggaggcgagcaatgcgctcgacggcggcgaggcggcgcccctgcactgggcctccggc
gaggagcagtcgctcgagcacaagttcctgctgccctgccacgggcagcaggagcagagc
ctgccgcatttcgacttcgacatcagccggggcgccgtggtcggcgacttcaacctcgag
ttcttctga
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