Panicum virgatum (switchgrass): 120675389
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Entry
120675389 CDS
T07260
Name
(RefSeq) single myb histone 4-like
KO
K09422
transcription factor MYB, plant
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120675389
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
120675389
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Gene cluster
GFIT
Motif
Pfam:
Linker_histone
Myb_DNA-binding
Myb_DNA-bind_6
SAMD1_WH
Forkhead
Motif
Other DBs
NCBI-GeneID:
120675389
NCBI-ProteinID:
XP_039812534
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Position
5N:53530099..53538248
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AA seq
285 aa
AA seq
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MGAPKQKWTSEEEDALRRGVLKHGAGKWRTIQKDPEFSPVLSSRSNIDLKDKWRNLSFSA
SGMGSRDKTKRTTGPSCSPSSTSQASAVPVANKVAEAPPDAEKKQQEVKPQPKYGAMILE
ALSELNEPNGTELTEICSFIEQKHGVPTTFRRAIGTKLRRLVDSKKIEKVDTKSYRLTDS
FATRTPAPIKASAPKQKDPSKPSKVSKNLGLFATSSPALEAAIAAAAKVADAEVKAHDAH
DQMMEAERILKMAEETESLLTIAAEIYDRCSRGEITTLNPAQREA
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgggcgcgccgaagcagaagtggacgtcggaggaggaggatgcgctccgccgcggcgtg
ctcaagcacggagccggcaagtggcggaccatccagaaggaccccgagttcagcccagtc
ctctcgtcccgctccaacatcgacctcaaggacaaatggaggaatctaagtttcagtgca
agtggaatgggttcaagggataaaacgaaaaggacaactggaccctcatgttccccatcg
tctacctcacaggcttcggctgtcccagtggcaaataaagttgctgaagctccaccagat
gctgagaaaaagcaacaggaagtgaaacctcaaccaaagtatggtgccatgatcctggaa
gctctttcggagttgaatgagccaaatggtacagaacttactgaaatctgcagcttcata
gagcaaaaacatggagtgccaacaacctttagaagagcgattggtacaaagttacggcga
cttgtagattcaaaaaaaattgaaaaggttgatactaagtcctataggctcaccgattcc
tttgcgacaagaactccagctccaataaaagcttcagctccaaaacagaaggatccatcc
aagccatcaaaggtgtcaaagaacctaggattgtttgccacctccagccctgcactagag
gcagccattgcggcagcagccaaagtagctgatgcagaggtgaaagcacatgatgcacat
gatcagatgatggaggcagaaaggatcctcaagatggctgaggagacggagtctctcctc
acgattgcagcagagatctatgatcgatgttcaaggggagagataaccacattaaatccg
gcgcaaagggaggcctga
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