Panicum virgatum (switchgrass): 120675552
Help
Entry
120675552 CDS
T07260
Name
(RefSeq) trafficking protein particle complex subunit 1-like
KO
K20300
trafficking protein particle complex subunit 1
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120675552
Membrane trafficking [BR:
pvir04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
120675552
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
TRAPP complex I
120675552
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sybindin
Sedlin_N
Motif
Other DBs
NCBI-GeneID:
120675552
NCBI-ProteinID:
XP_039812684
LinkDB
All DBs
Position
5N:complement(1386413..1389698)
Genome browser
AA seq
178 aa
AA seq
DB search
MQFFGGSSLTSVAPEASPAPAAPPGTGTGANAQVLYVFNRNGVCLLYREWHRPLRTLDPT
QDHKLMFGLLFSLRSFTAKIDPTAAEKGNLGVPLLPGQGCSFYSFKTNTYKLNFMESPSG
IKLILITHPRTGDQRDSLKHIYNLYVEYVVKNPLYAPGTPIKCELFNKHLDQYVRTLI
NT seq
537 nt
NT seq
+upstream
nt +downstream
nt
atgcagttcttcggcgggtcgtcgctgacctcggtcgcgccggaggcgagcccggccccg
gcggcgccccccggcacgggcacgggcgccaacgcgcaggtgctctacgtcttcaaccgc
aacggcgtctgcctcctctaccgcgagtggcaccgcccgctccgcaccctcgaccccacc
caggaccacaagctcatgttcgggctcctcttctccctccgatcattcaccgccaagatc
gacccgaccgcggctgaaaagggaaatcttggagtgccactactgccaggccaaggctgt
tcattctatagcttcaagacaaacacatacaaactgaacttcatggagagcccttctggt
attaagcttattctaattacacatccaaggactggtgatcagcgagattcactgaagcat
atctacaacctatatgttgagtatgttgtaaaaaatcctctgtatgctcctggcacacca
atcaagtgtgaacttttcaataaacatctcgatcaatatgtgagaacattaatctga
DBGET
integrated database retrieval system
