Panicum virgatum (switchgrass): 120675564
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Entry
120675564 CDS
T07260
Name
(RefSeq) transcription factor RAX1-like
KO
K09422
transcription factor MYB, plant
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120675564
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
120675564
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Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
120675564
NCBI-ProteinID:
XP_039812695
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Position
5N:4298327..4299716
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AA seq
255 aa
AA seq
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MGRTPCCDRAAVKRGPWSPEEDEALRSYVLRHGSGGNWISMPKKAGLKRCGKSCRLRWLN
YLRPDIRHGGFTDEEDAVIISLYSQLGSKWSLIASQLEGRTDNDVKNYWNTKLKRRLLAA
AATAGIVSTRSPPSVPRLPAAPASAPPAAATVTTHAPSLFPLLAIPTVKTEMYTCDDFLA
PAAFRDDPFAAADGSTSASAASSASNWSADNGAVGGGEGSFLLDFCAGSGLGAADDHLQL
PGGYYYPLDPNLSLV
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atggggaggacgccgtgctgcgacagggcggccgtgaagcggggcccctggtcgccggag
gaggatgaggcgctgcgcagctacgtcctgcggcacggcagcggcggcaactggatctcc
atgcccaagaaagccgggctcaagcggtgcggcaagagctgcaggctgcgctggctcaac
tatctccgcccggacatccgccacggcggcttcaccgacgaggaggacgccgtcatcatc
tccctctacagccagcttggtagcaagtggtcgctgatcgcctcgcagctggaggggagg
acggacaacgacgtcaagaactactggaacaccaagctcaagaggcgcctcctcgccgcc
gcagccaccgccggcatcgtctccacccgctccccgccatccgttccgcggctaccggcg
gcgccggcctcggcacctccggccgcggccaccgtcaccacgcacgcgccatcgctgttc
ccgttgctcgccatcccgaccgtgaagaccgagatgtacacctgcgacgacttcctggcg
ccggccgcgttccgggacgacccgttcgccgccgccgacggctccacctcggcctccgcg
gcgtcgtcggcatccaactggtcggcggacaacggtgctgtgggcggcggcgaggggtcg
ttcctcctggacttctgcgccggctccggcctcggcgccgccgacgaccacctccagctc
cccggcggctactactaccctctcgacccgaatttgtcgctggtatag
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