Panicum virgatum (switchgrass): 120675584
Help
Entry
120675584 CDS
T07260
Name
(RefSeq) protein LATERAL ROOT PRIMORDIUM 1-like isoform X1
KO
K27807
short internodes/stylish family transcription factor
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120675584
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
120675584
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF702
Motif
Other DBs
NCBI-GeneID:
120675584
NCBI-ProteinID:
XP_039812716
LinkDB
All DBs
Position
5N:complement(70888129..70890470)
Genome browser
AA seq
364 aa
AA seq
DB search
MRQSAALNYGMPDVGMVVVAPAASFHHTHHHHHHHEAAAAADPIFPLLSGGPCVLDPDAA
KSASGAPPGSAIQFWQPQSPSSAPAANPNPSASPFAYIKKPLPMLDTGAGSSGSGATTCQ
DCGNQAKKDCGHNRCRTCCKSRGFDCSTHVKSTWVPAARRLERQQLAASGSASSSPATAT
ASAAAAAAASASASKKPRLLASQTTTSHTSTSNATTPRSFDTTSSHQGTTNTCTAADASF
RDSLPRQVRAPAVFKCVRVTSIEDGEDEYAYQAMVTINGHLFKGFLYDQGPDDGRHAATS
NDDSAAGVPNISELHLGAASASVAGGSGVREGGSSMVPADLYGGGGGGGQHRILGGSSYG
GTMN
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgcgccagtcggccgcgctgaactacgggatgcccgacgtcggcatggtcgtcgtcgcg
cccgccgcctccttccaccacacgcaccaccaccaccaccaccacgaggccgccgccgcc
gcggaccccatcttcccgctgctctccggggggccctgcgtgcttgatccggacgccgcc
aagtcggcctccggggcgccgcccggcagcgccatccaattctggcagccgcagtcgccg
tcgtccgcaccggcagctaaccctaaccctagcgccagccccttcgcctacatcaagaag
cccctcccgatgctggacaccggcgccggctcctccggctccggcgccaccacgtgccag
gactgcggcaaccaagccaagaaggactgcggccacaaccggtgccgcacctgctgcaag
agccgcggcttcgactgctccacccacgtcaagagcacctgggtgcccgccgcccgccga
ctggagcgccagcagctcgccgcctcaggctccgcatcgtcctcccccgccaccgccact
gcctcagcggcggcggccgcggccgcgtccgcctccgcgtccaagaaaccccgcctcctc
gcgtcgcagaccaccacatcgcacacatcaacctccaacgccaccacgccgcgaagcttc
gacaccacctccagccaccaaggtactaccaacacttgcactgctgcagacgcgtcgttc
agggacagccttccgcggcaggtgcgcgcgccggcggtgttcaagtgcgtgcgcgtgacg
tccattgaagacggcgaggacgagtacgcgtaccaggccatggtgaccatcaacggccac
ctgttcaaggggttcctctacgaccagggccccgacgacggccgtcacgcggccaccagc
aacgacgactccgccgcgggggtgcccaacatctcggagctccacctcggagcggcgtcc
gcttccgtcgccggtggcagcggcgtcagggaaggtggctcctcgatggtgcccgcggac
ctatacggcggcggcggcggtggcgggcagcatcgcattctcggcgggtcaagctacggc
ggcaccatgaactga
DBGET
integrated database retrieval system
