Panicum virgatum (switchgrass): 120675643
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Entry
120675643 CDS
T07260
Name
(RefSeq) protein indeterminate-domain 7-like
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120675643
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
120675643
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GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_STOP2_C
zf-met
zf-C2H2_6
zf-C2H2_jaz
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
120675643
NCBI-ProteinID:
XP_039812782
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All DBs
Position
5N:complement(3938767..3941243)
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AA seq
478 aa
AA seq
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MMLKDLAAIQQQQQQHMAADENMSNLTSASGDLASVSSHPLPPPAKKKRSLPGNPDPDAE
VIALSPRTLMATNRYVCEVCGKGFQRDQNLQLHRRGHNLPWKLKQRNPKEAVRKKVYVCP
EPGCVHHDPARALGDLTGIKKHFSRKHGEKKWKCDRCAKRYAVHSDWKAHSKVCGTREYR
CDCGTLFSRRDSFITHRAFCDALAEESARAVTAAAAAVAGQHHPGMLFSQGAGGDEGAAA
GGLHLPAVQDQSQPLGGHGMSLQELCLKREQQQFAPAWLTAQQQHLELQAAGSGSVAVFG
SARALDPDYIGSSTPESTAQPAGLGFGFSPSSAAATASAHMSATALLQKAAQMGATLSRP
SNQGQMASTHSTSTTSAATANAAGNVPSTGAGAVGFGASHHFGADERTRADRDAGSGGNA
AVGAGAGGGNGGLTRDFLGLRAFSHGDILSMAGFDPCMSSPSSAAYEQGHQSSKQWHV
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgatgctcaaggatctggcggcgattcagcagcagcagcagcagcacatggccgccgac
gagaacatgtccaacctcacctccgcctccggcgacctggccagcgtctcctcccacccg
ctcccgccgcccgccaagaagaagcgcagcctccccgggaatccagaccccgacgccgag
gtgatcgcgctgtcgccgcggacgctgatggcgacgaaccggtacgtgtgcgaggtgtgc
ggcaaggggttccagcgcgaccagaacctgcagctgcaccggcgcggccacaacctgccg
tggaagctcaagcagcgcaatcccaaggaggcggtgcgcaagaaggtgtacgtgtgcccg
gagcccggctgcgtgcaccacgacccggcgcgcgcgctcggcgacctcaccggcatcaag
aagcacttcagccgcaagcacggcgagaagaagtggaagtgcgaccgctgcgccaagcgc
tacgccgtccactccgactggaaggcgcactccaaggtctgtggcacgcgcgagtaccga
tgcgactgcggcaccctcttctcaaggagggacagcttcatcacgcaccgggcgttctgc
gacgcgctggcggaggagagcgccagggcggtgaccgcggcggcggcggcggtggcgggc
cagcaccaccccgggatgctcttctcgcagggcgccgggggcgacgagggcgccgccgcg
ggcgggctgcacctgccggcggtgcaggaccagtcgcagccgctgggcgggcacgggatg
tccttgcaagagctgtgcctcaagagggagcagcagcagttcgcgccggcgtggctcacg
gcccagcagcagcacctggagctgcaggcggctggctccggtagcgtggccgtgttcggg
tcggcgagggcgctggacccagactacatcgggagctccacgccggagagcacggcgcag
ccggcgggcctcgggttcgggttctcgccgtcgtccgccgctgccacagcctccgcgcac
atgtcggccaccgcgctgctgcagaaggcggcgcagatgggtgcaacgctgagccggccg
tcgaaccagggccagatggcgagcacccacagcaccagcaccaccagtgctgccactgcc
aacgcagcaggcaacgtgcccagcactggcgccggtgccgtcggcttcggggcatctcat
cactttggagcggatgagaggaccagggccgatcgcgacgccggtagcggcggcaatgcc
gccgtgggtgccggcgccggaggcggcaacggcggcctcacccgggacttcttggggctc
cgggcgttctcccacggcgacatactgagcatggccgggttcgatccctgcatgtcgtcg
ccctcgtcggcggcgtacgagcaagggcaccagagcagcaagcagtggcatgtctag
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