Panicum virgatum (switchgrass): 120675651
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Entry
120675651 CDS
T07260
Name
(RefSeq) transcription factor RAX1-like
KO
K09422
transcription factor MYB, plant
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120675651
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
120675651
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Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
120675651
NCBI-ProteinID:
XP_039812788
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Position
5N:54789040..54790684
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AA seq
292 aa
AA seq
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MGRSPCCDKTKVKRGPWSQEEDAILRSFVERFGNAGNWIALPQKAGLKRCGKSCRLRWLN
YLRPELRHGGFTDEEDDLILSLYGEIGSKWSVIASRLPGRTDNDVKNYWNTKLKKRYLAS
TREGRPPAPPPATAADSQPQDDDEHPAAPTPPALANLDDASDTGAAAVDDDALLLKSEQL
YAELVGLIEQQSSWLTTTTGPPSSSAATPSSSSGTSPMGTSSGSCAAVWPTSKDVHDTTL
LSESSSSSLFDACHGVVGDDAFGAALLPAYSFQDLLAASYDEFTAVTQELQY
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atggggcggtcgccgtgctgcgacaagacgaaggtgaagcggggaccgtggtcgcaggag
gaggacgccatcctccggagcttcgtcgagaggttcggcaatgccggcaactggatagcc
ctgccccagaaagcagggctgaagcgatgcggcaagagctgccgcctacggtggctcaac
tacctccgcccggagctccggcacggcggcttcaccgacgaggaagacgacctcatcctc
tccctctacggcgagatcgggagcaagtggtcggtgatcgcgtccaggctccccggacgc
acggacaacgacgtcaagaattactggaacaccaagctcaagaagaggtacctggcgtcc
acaagagaaggaaggccgccagcaccacctcctgccaccgccgcggacagccagccccaa
gacgatgatgaacaccctgcagcgccgactcctccagctctggccaacctcgacgacgca
tcagacactggcgctgccgccgtcgacgacgacgcgctcctcctcaagtcggagcagctg
tacgcggagctcgtgggcctcatcgagcagcagtcgtcatggctgaccacaactactgga
ccgccgtcgtcgtcagcagcgacgccgtcgtcctcgtcgggaacaagtccgatgggtacc
agttcagggagctgcgccgccgtgtggcccaccagcaaggacgtgcatgacacaacgctc
ttgtccgagtccagcagcagcagcctgttcgacgcttgtcacggtgttgttggcgatgac
gcgttcggagcggctctgctacccgcgtactccttccaagacctcctggccgcgtcttac
gacgagtttaccgcggtgacgcaggagttgcagtactaa
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