Panicum virgatum (switchgrass): 120675660
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Entry
120675660 CDS
T07260
Name
(RefSeq) pentatricopeptide repeat-containing protein At3g58590-like
Organism
pvir
Panicum virgatum (switchgrass)
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Gene cluster
GFIT
Motif
Pfam:
PPR_2
PPR
PPR_1
PPR_3
PPR_long
MNE1
Motif
Other DBs
NCBI-GeneID:
120675660
NCBI-ProteinID:
XP_039812799
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Position
5N:complement(57255566..57260396)
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AA seq
663 aa
AA seq
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MRPPRPIPPPSASLFNSLIASRARAGRSADALSLLARMLAAGVAPTAFTFAPILSSPSAT
ACCAAQLHPHILKRGLLHGEPYSGTSLVGFFGRSGRFDGALKVFGEMTVRSVVTWNCLIS
SFVQFGRSCDALFWFKELMRSGDGLSDGSLVAVLPAFESPEQVHGLMRRIGMDSFSAVAN
ALLNSYCTCGAIYVTEKMFNELVFRDVASWNTMITGFARSNVPERAFELFLSMQLWGDSP
NEITFASVLYACTSMNGHEHGKFIHAKVIKRNLNTSVFLNTSLVDFYANCIGWRDAHKVV
EEIPENSTTCWNALISCHSDSDGPTTLVILRGMLRSGIKPNEVSFSASLKDPSLLDLQQI
HSLATRLGHGDNDYVSSGIISSYASHGIVSDALTYGVALNPDSCSVSMNVLAGVYNKARM
YQETKELLLHQQARDTTSWSILITACARSGDYLEAFGFFKQMRIMGYHVDNYVFVSLLSI
CTKNNSLDLGKSIHGLIIKTISGCCDTYVDNMLLDMYAKCGRIEDCLRAFEEMKDRNLIS
WTTMISGLGLNGFSHKALAWFKAMEKDGCKPDKVAILAVLSACRHGRLVEEGMKIFKIMK
ANYSVEAEMEHYICVVDMLCKCGHLKEAGVVIRGMPFRPSTVIWRTFLQGCKTYGVTEVQ
VFC
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgcgaccgccgcgcccgatcccgccgccctcggcttccctcttcaactccctcatcgcc
tcccgcgcccgcgccggccgctcggcggacgccctctcgctcctcgcgcgcatgctcgcg
gcaggggtcgccccgaccgccttcaccttcgcgccaatcctctcatcgccttccgccacc
gcctgctgcgccgcgcagctgcacccgcacatcctcaagagagggctgctccacggcgag
ccttactcggggacctcgctggtggggttcttcgggcggagtggacggtttgatggagcg
ctcaaggtgttcggtgaaatgacggtgaggagcgtggtcacctggaactgtctcatctct
tcgttcgtgcagtttggacgctcctgcgatgcccttttctggttcaaggagctcatgaga
agcggagatggcttatcagacggctctcttgttgcagtattgcctgcgtttgagtcaccg
gagcaagttcatggtctcatgaggagaatcggaatggattccttctcagcagttgcaaat
gcattgctgaattcatactgcacttgcggtgctatatatgtgacagagaagatgttcaat
gagttggtgttcagagatgtggcgtcttggaatacaatgataaccggttttgctaggagc
aatgtcccagagagagcttttgagcttttcttaagtatgcaactttggggtgattcgcct
aatgaaataacatttgccagcgttctttatgcctgcaccagtatgaatggacatgagcat
gggaagtttattcacgcaaaagttatcaagcgtaatctcaatacaagtgtgtttctcaac
acctcattggttgatttctatgcaaactgtattggttggagggatgcacataaagtagtt
gaagagattcctgagaatagcaccacgtgttggaatgctctgatttcttgtcactctgat
agcgacggtcctactactttggttattctgagaggcatgttacgatcagggattaaaccg
aatgaagttagtttttctgcatctctcaaggatccttctcttttggatctccagcagatt
cactcattagcgacaagattgggtcatggtgataatgactatgtttcaagtggtatcata
tcatcgtatgcttcacatggcattgtttctgatgccttgacttatggagttgcactgaat
cctgattcttgtagtgtctccatgaatgttttagctggagtgtataataaagctcgcatg
tatcaagaaactaaggagctactattacatcagcaagctagagatactacttcatggagc
atacttattactgcctgcgcacgcagtggtgattatcttgaagcttttggatttttcaag
cagatgagaattatggggtatcatgtcgataactatgtatttgtgagcttgctgagcatt
tgtacaaaaaacaacagtcttgatcttggcaagtcgattcatggacttatcatcaagacc
atttccggttgctgtgacacttatgttgataatatgttgctagatatgtatgctaaatgt
ggtagaattgaagactgtctcagagcttttgaggaaatgaaagataggaaccttatctca
tggacaaccatgatttccggccttgggcttaatgggttctctcataaggccttggcatgg
tttaaagccatggaaaaggatggctgcaaacctgacaaagtagcaattctagcagttctg
tcagcttgtagacatggtagacttgtggaggaggggatgaagatattcaaaattatgaaa
gctaattattcagttgaagctgagatggagcattacatttgtgtggtggacatgctgtgt
aagtgtggtcatttgaaggaagctggggttgtgattagaggcatgccattccgaccaagt
actgtcatatggcgcacattcctccaaggatgcaagacatatggtgtaactgaagtacaa
gtgttttgctag
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