Panicum virgatum (switchgrass): 120675688
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Entry
120675688 CDS
T07260
Name
(RefSeq) regulatory protein viviparous-1-like
KO
K09287
RAV-like factor
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120675688
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Other transcription factors
AP2/ERF
120675688
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3
Motif
Other DBs
NCBI-GeneID:
120675688
NCBI-ProteinID:
XP_039812821
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All DBs
Position
5N:complement(67931081..67934777)
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AA seq
706 aa
AA seq
DB search
MDACAGSSPPHSQENPPERGGDLGEAPAEEIGGEAADDFLFAEDTFPSLPDFPCLSSPSS
STFSSSSSSNSSCAYTTAAGGAGGGGGGGADGAAGERSGPASAGEGFDALDDIDQLLDFA
SLSMPWDSEPTFPEVSMKLEDAMFAPPHPVGEGRREGKAVLEGTGGEEACMDAGAAGENL
PRFFMEWLTSNRENISAEDLRSIRLRRSTIEAAAARLGGGRQGTKQLLKLILTWVQNHHL
QRKRPRDGLEEAAGLHGHGHSQLSSPGGNPGYEFPAGVQDMAAGGGTSWMPYQQPFTPPA
YGGDAVYQSAAGQYPFHQSSSTSSVVVNSQPFSPPAVGDMHAAGGGNMPWTQQYMPYPGA
STGSYPLPPVVPQPFSPGFGGQYAGAGHPMPPQRMMVAVEASATKEARKKRMARQRRLSC
LQQQRSQQLNLGQIQVPVLPQEPSAHQSTHSVPVTPSAGGWGFWSPGSPQQVQNALSKSN
SSRAPMQQVPRSPEAAPPPPPAKPAPGARQEESPQPSTASEKRQGAKTDKNLRYLLQKVL
KQSDVGSLGRIVLPKKEAEVHLPELKTRDGISIPMEDIGTSRVWNMRYRFWPNNKSRMYL
LENTGEFVRSNELQEGDFIVIYSDVKSGKYLIRGVKVRPAQEQQGNGSSALGKHKHGYPG
PEKAGGASDDGGADGTGKPDGGCKGRSPQGVRRARHQGATSMAVSI
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atggacgcctgcgccggctcgtcgccaccgcactcccaagagaacccgccggagcgcggt
ggcgacctgggggaggccccggcggaggagatcggtggggaggcggcggatgacttcctt
ttcgccgaagacacgttcccgtccctcccggacttcccttgcctctcgtcgccgtccagc
tctacgttctcgtcgtcgtcctcgtccaactcctcctgcgcctacaccaccgcggcagga
ggagctggcggcggcggcggcggcggcgctgacggcgccgccggcgagcggtccgggcct
gcctcggccggtgaagggtttgatgcgctcgatgacatcgaccagctcctcgacttcgcg
tcgctgtccatgccgtgggactccgagccaacgttccccgaagttagcatgaagctggag
gacgctatgttcgcgccgccgcatcccgtgggcgagggcagacgcgaaggtaaagccgtg
ctggaagggactgggggagaagaggcctgcatggatgcgggggcggcgggggagaacctg
ccgcgcttcttcatggagtggctcactagcaaccgtgaaaacatctcggccgaggatctc
cgcagcatccgcctccgccgctccaccatcgaggccgccgccgcccggctcggcggcggg
cgccagggaaccaagcagctactcaagctcatccttacctgggtgcagaaccatcacctc
cagaggaagcgccctcgcgacggtttggaggaggcggcgggattgcacggccatggccac
agccagctctccagcccggggggcaaccccggatatgagttccccgccggcgtccaggac
atggcggccggcggcggcacatcctggatgccctaccaacagccgttcacgccacctgct
tacggcggcgacgccgtctaccagagcgccgcaggccaataccctttccaccagagctcc
agcacgagcagcgtggtcgtgaacagccagccgttctccccgccggcggtaggcgacatg
cacgccgcgggcggtgggaacatgccctggacgcagcagtacatgccgtaccctggggca
tccacaggctcgtaccctctgccgcccgtcgtgccgcagccgttctcccccggattcggc
gggcagtacgccggcgccggccaccccatgcccccccagcgcatgatggttgcagtggag
gcttccgcgaccaaggaggcccgtaaaaagcgcatggcgagacagcggcgcctgtcctgc
ctgcagcagcagcgcagccagcagctgaacctgggccagatccaggtccccgttctcccg
caggagccgtccgctcatcagtcgacgcactccgtgccggtgacgccgtcagccggtggc
tgggggttctggtcgccgggcagcccgcagcaggtccagaacgcgctctccaagtccaat
tcctcaagggcgccgatgcagcaggtgccgcgctccccggaggcggcgccgccgccgcca
ccggcgaagccggcgccgggtgctcggcaggaagagagcccccagccctcgacggcttca
gagaagcggcagggggcgaagacggacaagaacctgaggtacctgctgcagaaggttctg
aagcagagcgacgtcgggagcctcggccgcatcgtgctccccaaaaaggaggcggaggtt
cacctgccggagctgaagacgagggatggcatctccatccccatggaggacatagggaca
tcacgcgtgtggaacatgcggtacaggttttggcccaacaacaagagcagaatgtatctg
ttagagaacacgggggaatttgttcgttccaatgagcttcaggagggagatttcatagtt
atctactctgatgtcaagtcgggcaaatatctgatacggggcgtcaaggttaggccggcc
caggagcagcagggcaacggttccagcgcgctaggcaagcacaagcatgggtatccaggt
ccagagaaagccggtggtgcttctgatgacggcggcgccgacgggaccggtaagcctgac
ggcggctgcaaggggaggtccccgcaaggtgtgcggcgggctcgccaccagggagccacc
tccatggccgtcagcatctga
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