Panicum virgatum (switchgrass): 120675900
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Entry
120675900 CDS
T07260
Name
(RefSeq) ATP-dependent zinc metalloprotease FTSH 5, mitochondrial-like
KO
K08955
ATP-dependent metalloprotease [EC:3.4.24.-]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pvir01002
]
120675900
Peptidases and inhibitors [BR:
pvir01002
]
Metallo peptidases
Family M41: FtsH endopeptidase family
120675900
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Gene cluster
GFIT
Motif
Pfam:
Peptidase_M41
AAA
AAA_lid_3
AAA_5
TIP49
RuvB_N
AAA_22
AAA_16
nSTAND3
AAA_25
ORC-CDC6-like
AAA_28
AAA_17
AAA_2
IstB_IS21
Mg_chelatase
AAA_14
AAA_33
AAA_7
NACHT
Parvo_NS1
AAA_18
DUF5906
Zeta_toxin
bpMoxR
Erp_C
ABC_tran
RIFIN
Motif
Other DBs
NCBI-GeneID:
120675900
NCBI-ProteinID:
XP_039813042
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Position
5N:40464821..40470048
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AA seq
710 aa
AA seq
DB search
MAWRRVLTQITKHRPTKAIYNELVASSPLGTLRSEVTAGARIRNLQERNQSSYIGSLARR
VRDLDSPSETSLLKEIYRSDPERVIQIFESQPSLHSNPAALSEYVKALVRVDRLDESTLL
KTLQRGVAASTRGEESFSSIPALVGAGQATKDGVFGTANAPIHMVTAETGQFKDQLWRTF
RSIALTFLLISGIGALIEDRGISKGLGLNEEVQPSMESNTKFSDVKGVDEAKSELEEIVH
YLRDPKRFTRLGGKLPKGVLLVGPPGTGKTMLARAIAGEAGVPFFSCSGSEFEEMFVGVG
ARRVRDLFAAAKKRSPCIIFIDEIDAIGGSRNPKDQQYMKMTLNQLLVELDGFKQNEGII
VIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQILESHMSKVLKSDDVDLMIIARG
TPGFSGADLANLVNVAALKAAMDGAKAVTMTDLEYAKDRIMMGSERKSAVISDECRKLTA
YHEGGHALVAIHTEGAHPVHKATIVPRGMALGMVSQLPEKDETSVSRKQMLANLDVCMGG
RVAEELIFGDIEVTSGASSDFQQATATARAMVTKYGMSKQVGLVSYNYEDDGKSLSSETR
LLIEQEVKNFLENAYNNAKTILTKHNKELHALANALLEHETLTGAQIKNILAQVNNKQQQ
EHAIEAPQKNPAAPASPASPAASAAAAAAAAAAAAQQAAAKAKGVAGIGS
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atggcgtggcggcgcgtccttacccagatcacaaagcaccgacccacaaaagcaatctac
aatgagctagttgcttcctcccctttgggcactcttagaagtgaagtcactgcaggtgca
agaattagaaacttacaagagaggaatcagtcaagctatattggtagccttgcacgccgt
gtgcgagacctagactcaccaagcgaaacttctctgcttaaagaaatttacagaagtgac
ccagaacgtgtcatacaaatatttgaaagtcaaccttcattgcattccaatccagcagca
ctttcggagtatgtaaaagctctcgtaagggttgataggttggatgagagcaccttgctt
aaaacattgcagagaggtgttgctgcttctacaagaggggaagaaagctttagtagcatt
ccagcattagttggtgctggccaagcgacaaaagatggagtttttggcactgcaaatgca
cctattcatatggttacagcagaaacaggtcaatttaaagatcagctttggcgtaccttc
cgaagcattgcactaactttccttcttatttcgggcattggggctctcatcgaggataga
ggaatcagcaaaggccttggtctgaatgaagaggttcaaccaagcatggagtctaataca
aagttcagtgatgtaaagggtgttgatgaagcaaaatctgaacttgaggaaatagttcat
tacctccgagatcccaagcgcttcacgcgtcttggtggaaaacttccaaaaggtgtcttg
cttgttggccctcctggcacagggaaaaccatgctagcgagggctattgctggtgaagct
ggtgtacctttcttttcttgcagtggaagtgagtttgaggagatgtttgtgggagttgga
gctcgaagagtgcgcgacctttttgctgcagcaaaaaagcgttctccttgtataatattc
attgatgaaattgatgcaattggtgggagcaggaatccaaaggatcaacagtatatgaag
atgaccttgaatcagttgcttgttgagttggatggctttaagcagaatgaggggataatt
gtcatcgctgcaaccaacttccctgagtcactagataaagccctagtcagacctgggcgt
tttgaccgtcatattgttgttcccaatccggatgttgagggtcggcggcaaattctggag
tcccatatgtcaaaggtcttgaagagtgatgatgtggacttgatgatcattgctagggga
acgccgggattctctggtgctgaccttgctaacttggtaaatgttgctgctcttaaggct
gccatggatggtgcaaaagctgtcacaatgactgatcttgagtatgcaaaggaccgaatc
atgatgggtagtgagcgaaagtcagcagttatttctgatgaatgcaggaagttgacggca
taccatgagggagggcatgctcttgttgccatccacacagaaggtgctcaccctgtccac
aaagctaccatagtacccagggggatggccctaggaatggtgtcccagctacctgaaaaa
gatgagactagtgtgtcaaggaaacagatgctggcaaatttggatgtctgcatgggtgga
cgtgtcgcggaggagctgatatttggggatattgaagtgacatctggtgcgtcatctgat
ttccagcaagcaactgcgacagcaagagcaatggttactaaatatggcatgagcaagcag
gttggccttgtctcttacaactacgaagatgatggaaagagcttgagttcagaaacaaga
cttttaattgagcaggaggtgaagaatttcttggagaatgcatacaataatgcaaagact
attctcacgaaacacaataaggagctccatgctctagctaacgcacttctagagcatgag
actctcacgggagcccagataaagaacatattagcccaggtaaataacaagcagcaacag
gagcatgccattgaagcaccacagaagaaccctgccgctccagcttcccctgcatcacca
gctgcatcagccgcagcagccgctgctgcagccgctgcagccgcacagcaggcggcagcc
aaagccaagggggtagctggtatcggatcttag
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