Panicum virgatum (switchgrass): 120675926
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Entry
120675926 CDS
T07260
Name
(RefSeq) lysine-specific demethylase 4B-like
KO
K11380
NuA3 HAT complex component NTO1
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pvir03036
]
120675926
Chromosome and associated proteins [BR:
pvir03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NuA3 complex
120675926
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-HC5HC2H_2
zf-HC5HC2H
PHD_2
PHD
C1_2
C1_1
Motif
Other DBs
NCBI-GeneID:
120675926
NCBI-ProteinID:
XP_039813066
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All DBs
Position
5N:4900767..4903542
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AA seq
615 aa
AA seq
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MEIAENGFPSGSARDLPPSKRFKYVGAQHGSAPCVLLPAKKRVFPPPEEEAAASVCLPVK
KRTVVARPPEEPAAAVPFCLPAKKRAIVAPPPEDAAPVCLPAKKRAYATPADAVLPACLP
AKKRTSAQHPPDLVASTCERVHAPAPRDAGAGSAPVPLPASKRVCAVPAADAAASTCVVA
KTRILAPGPRQDAARSVPVCLPANKRVMPPPSVESDGPRFGTAKEARPQGSNKPGGGAII
PRVANGTEGCARGKDFKKPEKPINPKETHEQVSMKTGRPRSPNKFKDLEKKASKTVNGKQ
SGVFARGKSDKAADAKGAALKQESMNGSAEVRARGKDFKKPEKPINPMVTKEQMPMKPST
PRSPNKSEDLGKKACKIVNGKQTEAGVEVRKKSDKVADPKGAALEELRNWDDEVVQEAVE
EDDGVLCAVCASTDGDPSDPIVFCDGCDLMVHASCYGSPLAQAIPDGDWFCSLCTAKKSK
PAARPSCCLCPARGGAMKRTTEGQWAHISCALLVPEVFFRDPDGRDGVDCSLVPAHRFAK
DCYICESNNGCALECSQPKCALGFHVSCGLDAGLCIEYREGKGGAIVAGFCREHTELWEK
QQLTGKYKIVARGEE
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atggagatcgccgagaacggctttccgagcggcagcgcccgtgacctgccgccctcgaag
cgattcaagtacgtcggcgcccagcacgggtcggctccgtgcgtgctactgccggccaag
aagcgcgtgttcccgccgccggaggaggaggccgccgcctccgtttgcctcccggtaaag
aagaggaccgttgtggcgcggccaccggaggagccggcggcggctgtcccgttctgcctc
ccggcgaagaagagagccattgtggcgccgccgccggaggacgcggccccggtgtgcctc
cccgccaagaagcgcgcctacgcgacgccggcggatgcggtattgccggcgtgccttcct
gccaagaagcgcacgagtgcgcagcatccgccagatttagttgcttccacatgcgagcgc
gtccatgcgccggcgccgcgggacgccggcgccggttctgccccggttcccctaccggcc
agcaagcgcgtgtgcgcggtgccggcggcggatgcggctgcttcgacctgcgtcgtggcc
aagacgcgcatcctcgcgccaggtcctcggcaggacgccgcgcgttccgtcccggtgtgc
ttaccggccaacaagcgcgtgatgccgcctccatccgtggagtcagatggtcctcggttc
ggcactgccaaagaagccaggcctcaaggatccaacaagcccggcggcggtgccatcatt
cccagagtggcaaatggcactgaaggttgcgcaagaggcaaagatttcaagaaaccggag
aagcccatcaatcctaaggaaacccatgagcaagtgtccatgaaaacgggcagaccaaga
tctccaaacaagtttaaagatctggagaagaaagccagcaagaccgtcaatggcaagcag
tctggagtttttgctcgcgggaaatctgacaaagcggctgatgccaaaggagcagcactc
aaacaggagtcgatgaatggatctgctgaggttcgcgcgagaggcaaagatttcaagaaa
cctgagaaacccatcaatcctatggtaaccaaggagcaaatgcccatgaaaccaagcaca
ccaagatctccgaataaatctgaagatttggggaagaaagcctgcaagatcgtcaatggc
aagcagactgaagctggggttgaagtgcgcaagaaatccgataaagtggccgatccgaag
ggagcggcactcgaggagttgaggaattgggatgatgaagtggtgcaagaagccgttgag
gaggatgacggcgtgctctgcgccgtgtgcgcgagcactgacggcgacccgtccgacccc
atcgtgttctgcgacgggtgtgacctcatggtgcacgcctcctgctacggcagcccgctc
gcgcaggccatccccgacggcgactggttctgctcgctctgcaccgccaagaagagcaag
ccggcggcgcgcccgagctgctgcctctgcccggccaggggcggcgcgatgaagcgcacg
acggaggggcagtgggcgcacatctcttgcgcgctgcttgttccggaggtgttcttccgg
gaccccgacggccgcgacggcgtcgactgctccctcgtgccggcccaccggttcgccaag
gactgctacatctgcgagagcaacaacgggtgcgcgctcgagtgctcccagcccaagtgc
gccctcggcttccatgtctcctgcggcctcgacgctggcctgtgcatcgagtaccgggag
gggaagggcggcgccatcgtcgccggcttctgcagggagcacaccgagctctgggagaag
caacaactgacaggcaagtacaagattgtggcaagaggggaggaatga
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