Panicum virgatum (switchgrass): 120675980
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Entry
120675980 CDS
T07260
Name
(RefSeq) transcription factor tau subunit sfc1-like isoform X1
KO
K15202
general transcription factor 3C polypeptide 5 (transcription factor C subunit 1)
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pvir03021
]
120675980
Transcription machinery [BR:
pvir03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
120675980
TFIIIC, fungi type
120675980
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Gene cluster
GFIT
Motif
Pfam:
Tau95
Tau95_N
HTH_32
Motif
Other DBs
NCBI-GeneID:
120675980
NCBI-ProteinID:
XP_039813118
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Position
2K:39370655..39385846
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AA seq
558 aa
AA seq
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MATPPSSPTPAPPEPATEPPSPSTITDGAASDTLPAAEAFAVHYPGYPSSPARAARTLGG
LPTIAKVRSSDPSARLELRFRPEDPFCHPAFGESRASTGLVLRLSRRKGAAAPRAEVVAR
VRTAYHFEGMADFQHVVPVHAAQVRKRKRSNSQNDNEHLGSDKTRHQETDDGDVMMLVPP
LFSMKDRPTKIALLPSSNAVSKSMHRGVVQERWEMKVGPTLALPFNIQVVPGKINWEDHV
PKNSVDWDWQMAVCKLFDERPVWPRQSLYERLQDDGVHVSQNQFKRLLFRAGYYFSTGPF
GKFWIRRGYDPRKDPDSRIYQRIDFRVPPELRNLLRTKDSGSQKWAEMCKLEVMPSQSFI
FLQLFELKDNFIQEEIRKPSYQSICSHFTGWFSKPMMKTLRLQVSIRFFSLLPSEEAKSL
LRNAHELIERSKKQEALWRSERSKEDKHIDEEAPSTHTGTEDQVGLNKSDSEDVDDEEEE
EESNGYDSPPMAEGFRDFNLDDSYALGEGFSNGYLEEVLRSFPLQEDGQNRSADAPNADG
SDGEFEIFEQPSDDESDG
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggctacaccgccctcttccccaacccccgcgccgccggagccggcgaccgagccgccg
tctccgtccaccatcacagatggcgccgcctccgacacgctcccggcggccgaggccttc
gcggtgcactacccgggctacccctcatcccccgcgcgcgcagcccgcaccctcggcggc
ctacccaccatcgccaaggtccggagctccgaccccagcgcccgactggagctccgcttc
cgccccgaggaccccttctgccacccggccttcggcgagtcccgcgcctccacgggccta
gtgctccgcctctccaggcgcaagggtgctgcggcgccgcgcgccgaggtggtcgcacgc
gttcggaccgcctaccacttcgaaggtatggcagattttcagcatgttgttccagtgcat
gctgcacaagtaagaaaaagaaaacggtcaaattcccaaaatgataatgaacatttaggt
agtgataagacaagacatcaggaaacagatgatggagatgtcatgatgttggtaccccca
ctcttctcaatgaaggatagacccacaaagatagcgcttctaccatcatcaaatgcagta
tctaaaagcatgcacaggggagttgtacaagaacgatgggagatgaaggttggaccaact
cttgctcttcctttcaacattcaagttgttccggggaagattaattgggaagaccatgta
ccaaaaaattcagtagattgggactggcaaatggctgtctgcaaattgtttgatgagcgt
cctgtgtggccaaggcaatcactttatgaacggctgcaagatgatggtgtgcatgtctca
caaaaccaattcaaaaggctcctgtttagagctggatactacttctctactggacctttc
ggtaaattctggatcagaagaggatatgaccctcgtaaagatcctgactctcgaatatat
cagagaattgattttcgtgtgcctcctgagctaaggaatcttctaaggacgaaggattct
ggatctcaaaagtgggcagagatgtgcaagcttgaagtgatgccatctcagagtttcatc
tttctgcaattatttgaattgaaggataactttattcaagaagaaattcgaaaaccttct
tatcaatcaatttgttcacattttacaggatggttttctaagccaatgatgaaaactctg
aggttgcaagtgagcataaggttcttctctttattacctagtgaagaggcaaaaagcttg
ttgaggaatgcccacgaacttattgaaaggtccaagaagcaggaagccctttggagatct
gagcgatcaaaagaggataagcatattgatgaagaagctccttccacacatacaggaact
gaggatcaagttggccttaacaaatctgatagtgaagatgtagatgacgaagaagaggaa
gaggagtcgaatggttatgattctccacctatggcagagggttttcgcgatttcaacttg
gatgattcctatgccctcggtgaaggcttctccaatggataccttgaagaagtgctgcgc
agctttccattgcaggaagatggccaaaacagatcagctgatgccccgaatgctgatggt
agcgatggggagtttgaaattttcgaacaacccagtgacgatgagtctgatggttag
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