Panicum virgatum (switchgrass): 120675990
Help
Entry
120675990 CDS
T07260
Name
(RefSeq) protein DETOXIFICATION 32-like
KO
K03327
MATE family, multidrug and toxin extrusion protein
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvir02000
]
120675990
Transporters [BR:
pvir02000
]
Solute carrier family (SLC)
SLC47: Multidrug and Toxin Extrusion (MATE) family
120675990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MatE
Motif
Other DBs
NCBI-GeneID:
120675990
NCBI-ProteinID:
XP_039813129
LinkDB
All DBs
Position
5N:complement(58321814..58323733)
Genome browser
AA seq
399 aa
AA seq
DB search
MGSALETLCGQAVGAGQLQMLGVYMQRSWIICLATSLALLPLYLLASPVLRLLRQSPAIA
AVSGRYARWCVPQLFAYAVNFPIQKFYQAQSRVWVMTAISGAVLAAHALLNWVVVARLGR
GMVGAAVVGDVSWWLLNAAQFVYLVGGSFPEAWTGFSRKAFANLGGFVKLSIASAVMLCL
EMWYYTAVLILVGCLKNPEIQVGAISICMNYQLWTLMVALGFNAAVSVRVSNELGANHPK
AAKFSVVVATTTSAAIGLVFTAVALAARKQMPRLFTGDGAVVKETAKFGYLLAATIFLNS
IQPVLSGVAIGAGWQSLVAFVNIGCYYLVGLPLAAVFGLKLKLNATGIWVGVLIGTVLQT
AILFVILFRTKWQKEAMLAEERIRVWGGNVELPRTQESR
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atggggagcgcgctggagacgctgtgcggccaggccgtgggcgccgggcagctccagatg
ctgggcgtctacatgcagcgctcctggatcatctgcctcgccacgtcgctcgccctgctc
ccgctctacctcctcgcgtccccggtcctgcgcctgctccggcagtcgccggccatcgcg
gcggtgtccgggcggtacgcgcgctggtgcgtgccgcagctgttcgcctacgccgtcaac
ttccccatccagaagttctaccaggcgcagagcagggtgtgggtcatgacggccatctcg
ggcgccgtgctcgccgcgcacgcgctgctcaactgggtcgtcgtggccaggctcgggcgc
gggatggtcggcgcggccgtcgtcggcgacgtctcgtggtggctgctcaacgccgcgcag
ttcgtgtacctcgtcggcgggtcgttcccggaggcgtggacggggttctcgcgcaaggcg
ttcgccaacctcggcggcttcgtcaagctctccatcgcgtcggctgtcatgctatgccta
gagatgtggtattatacggcagtgctcattctggtggggtgcctaaagaacccagagatt
caagttggagcgatttccatatgcatgaactatcagctttggaccctgatggttgctctt
ggcttcaatgctgcagtaagtgttcgcgtctcgaacgagcttggcgccaaccacccgaag
gcggccaagttctcagtggtcgtcgccacgaccacatcggccgccatcgggttggtcttc
acggcggtcgctctggcggcgaggaagcagatgcctcggctcttcaccggcgatggcgcg
gtcgtcaaggagaccgccaagtttgggtacctcctggccgccaccatatttctcaatagc
atccagccggtgctttcaggggttgcgatcggtgccgggtggcagtccttggtcgcgttc
gtcaacatcggctgctactacctcgtcggcctgcccctcgcagccgtgtttggcctcaag
ctgaagctcaatgcaacagggatttgggtgggagtgttgattggaacggtgttacagact
gcgattctgtttgtgatcctcttcagaaccaaatggcagaaagaggctatgctagcagaa
gagagaatacgggtgtggggaggaaacgttgagctgccacggactcaagaatcaagataa
DBGET
integrated database retrieval system