Panicum virgatum (switchgrass): 120675995
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Entry
120675995 CDS
T07260
Name
(RefSeq) protein indeterminate-domain 7-like isoform X1
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120675995
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
120675995
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GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_4
zf-C2H2_jaz
zf-C2H2_STOP2_C
zf-C2H2_6
zf-met
Motif
Other DBs
NCBI-GeneID:
120675995
NCBI-ProteinID:
XP_039813137
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All DBs
Position
5N:40343242..40348039
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AA seq
446 aa
AA seq
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MSSSNLTSSASGGPNAPPAAGNKRKRSLPGNPDPDAEVVALSPATLMATNRFVCEICGKG
FQRDQNLQLHRRGHNLPWKLKQRGTGKEAQRKKVYVCPEASCVHHDPARALGDLTGIKKH
FFRKHGEKKWKCDKCSKKYAVHSDWKAHSKICGTREYKCDCGTIFSRRDSFITHRAFCDA
LTEESAKVIGLGAMAAAAPAHHHPLLFSPPPPQVMQHQVQDLAALQENHHHHQEVMQPPQ
AQQQQHCNYAMKTEMPPWPAMAYDHHAHPLLQPLCNAAQSSATSAQPPPPAASAHLSATA
LLQKAAQMGATIGGAGAGGGAHYTQMAGPAASAPGGATFGLGLPGLSAQRQPVDGVMGGL
TRTASHGRGGEDGGGGGGGGDGMTRDFLGLRAFSHRDILDLAGFDSSCMGAVAANGNMTC
YEPQQQAQAQQQESSNEPWHGMGSHG
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgtccagctccaacctcacctcctccgcctccggcgggcccaacgcgccgccggccgcc
ggcaacaagcgcaagcggagcctcccaggaaaccccgaccccgacgcggaggtggtggcg
ctgtcgccggcgacgctgatggcgacgaaccggttcgtgtgcgagatctgcggcaagggg
ttccagcgggaccagaacctgcagctgcaccggcgcgggcacaacctgccgtggaagctc
aagcagcggggcaccggcaaggaggcgcagcggaagaaggtgtacgtgtgcccggaggcc
tcgtgcgtgcaccacgaccccgcccgcgcgctcggcgacctcaccggcatcaagaagcac
ttcttccgcaagcacggcgagaagaagtggaagtgcgacaagtgctccaagaagtacgcc
gtccactccgactggaaggcgcactccaagatctgcggcaccagggagtacaagtgcgac
tgcggcaccatcttctccaggcgggacagcttcatcacgcaccgcgccttctgcgacgcg
ctcaccgaggagagcgccaaggtcatcggcctcggcgccatggccgccgccgcgccggcg
caccaccacccgctgctcttctcccctccgccgccgcaggtgatgcagcaccaggtccag
gacctcgccgcgctccaggagaaccaccaccaccaccaggaggtcatgcagccgccgcaa
gcgcagcagcagcagcactgcaactacgccatgaagacggagatgccgccgtggccggcg
atggcttacgaccaccacgcccacccgctgctgcagccgctatgcaacgccgcgcagagc
tcggccacgtccgcgcagccgccgccgcccgccgcgtcggcgcacctgtcggccacggcg
ctgctgcagaaggcggcgcagatgggcgccaccatcggtggcgccggcgcaggcgggggc
gcgcactacacccagatggcgggccccgcggcgagcgcgcccggcggcgccaccttcggg
ctcggcctccctggcctgagcgcgcagcggcagccggtggacggcgtcatgggcggcctc
acgagaaccgcctcccacggccgcggcggcgaggacggcggcggcggcggcgggggcggc
gacggcatgacgagggacttcctgggcctgcgcgccttctcccaccgcgacatcctcgac
ctcgccggcttcgactcctcgtgcatgggcgccgtcgccgccaacggcaacatgacctgc
tacgagccgcagcaacaggcgcaggcgcagcagcaggaaagcagcaacgagccatggcac
ggcatgggcagccatggctaa
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