Panicum virgatum (switchgrass): 120676001
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Entry
120676001 CDS
T07260
Name
(RefSeq) WRKY transcription factor WRKY24-like
KO
K13424
WRKY transcription factor 33
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04016
MAPK signaling pathway - plant
pvir04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
120676001
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
120676001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120676001
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Other transcription factors
WRKY
120676001
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Gene cluster
GFIT
Motif
Pfam:
WRKY
Motif
Other DBs
NCBI-GeneID:
120676001
NCBI-ProteinID:
XP_039813142
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Position
5N:62202917..62205690
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AA seq
558 aa
AA seq
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MTTSSSGSIEAPANSRPGSFSFASTNFTVMLGGSAAAAGGASRYKAMTPPSLPVSPPPVS
PSSFFNIPGGLNPADFLDSPALLTSSFFPSPTTNAFASQQFSWLTPPGAEQGGKDEQRQS
YPDFSFQTAPTTEEAVRTTTTFQQPPVPPAPLGEEAYRSQQQQQQQPWSYHQQQPGMDAG
SSQAAYGGQFQAGSSDAAAMAPHAPASGGYSQAQSQRRSSDDGYNWRKYGQKQVKGSENP
RSYYKCTFLGCPTKKKVERSLDGQITEIVYKGTHNHAKPQNTRRNSSAAAQLLQGAGEAS
EHSFGGTPVATPENSSASFGDDEAAGVGSPRAGNAGGDEFDEDEPDSKRWRKDGDGEGIS
MAGNRTVREPRVVVQTMSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTTAGCPVRKHV
ERASHDLRAVITTYEGKHNHDVPAARGSAALYRPAPPPTDTYLAAAPGVRPPAPSMAYQT
GQRYGFGGQSSFGLGAGAPAQQSGGGGFGFPSGFDNPMGSYMSQHQQQQRQNDAMHASRA
KEEPREDMAFFPQSMMYN
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgaccacgtcgtcgtccgggagcatcgaggcgccggcgaactcgaggcccggatcgttc
tcgttcgcgagcacgaacttcacggtcatgctggggggctccgcggccgcggccggcggg
gcgtcgaggtacaaggccatgaccccgccgtccctgccggtgtcgccgccgccggtgtcg
ccctcgtccttcttcaacatccccggcggcctgaaccctgccgacttcctcgactcgccg
gccctcctcacctccagtttcttcccgtcgccgacgacgaacgcattcgcctcgcagcag
ttcagctggctgacgccgccgggcgcggagcaaggcggcaaggacgagcagaggcagtcg
tacccggatttctcgttccagacggcgccgacgaccgaagaggccgtgcggacgacgacg
accttccagcagccacccgttccaccggccccactgggtgaagaggcatacagaagtcag
cagcagcagcagcagcaaccatggagctaccaccagcagcagccaggcatggacgcgggc
tccagccaggcggcctacggcgggcagttccaggcaggctcgtcggacgccgccgcgatg
gcgccgcacgcgccggcgagcggcgggtacagccaggcgcagtcgcagaggcggtcgtcg
gacgacgggtacaactggcgcaagtacgggcagaagcaggtgaaggggagcgagaacccg
cgcagctactacaagtgcactttcctgggctgccccaccaagaagaaggtggagcggtcg
ctggacggccagatcaccgagatcgtgtacaagggcacgcacaaccacgccaagccgcag
aacacgcgcaggaactccagcgcggcggcgcagctgttgcagggcgccggcgaggcgtcc
gagcactcgttcggcggcacgcccgtcgcgacgcccgagaactcctcggcgtccttcggg
gacgacgaggccgccggcgtgggctcgccgcgggctgggaacgccggcggcgacgagttc
gacgaggacgagccggattccaagagatggaggaaagacggcgacggcgaggggatctcc
atggccggcaaccgcacggtgcgcgagccgagggtcgttgtccagaccatgagcgacatc
gacatcctcgatgacggctaccgctggaggaagtacgggcagaaggtggtgaagggaaac
cccaaccccaggagctactacaagtgcacgacggccgggtgcccggtgcggaagcacgtg
gagcgcgcgtcgcacgacctgcgcgccgtgatcaccacgtacgagggcaagcacaaccac
gacgtgcccgccgcgcggggcagcgccgcgctgtaccggcccgcgccgccgccaacggac
acctacctcgccgcggcccccggcgtgaggccgccggcgcccagcatggcttaccagacg
gggcagcggtacgggttcggcggccagagctcgttcggcctcggcgccggcgcgccggcg
cagcagagcggcggcggcggcttcgggttcccctccggcttcgacaacccgatggggtcg
tacatgagccagcaccagcagcagcagcggcagaacgacgccatgcacgcgtcgagggcc
aaggaggagcccagggaggacatggcgttcttcccgcagtcgatgatgtacaactga
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