Panicum virgatum (switchgrass): 120676019
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Entry
120676019 CDS
T07260
Name
(RefSeq) transcription factor MYB1-like
KO
K09422
transcription factor MYB, plant
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120676019
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
120676019
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Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
120676019
NCBI-ProteinID:
XP_039813163
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Position
5N:complement(63930153..63931881)
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AA seq
394 aa
AA seq
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MSAPETAASPAPEPPSDPPAVSDAAHSNSTPMAVETQTLTEPPPQPQSHQASPPPSGEDD
DVVVVSGASVGGDAAASAASAGNATTEERVRGPWSPEEDAVLSDLVEKLGARNWTLIARG
IPGRSGKSCRLRWCNQLDPQVKRKPFTEEEDRIIMAAHAVHGNKWACIAKLLDGRTDNAI
KNHWNSTLRRRHCNDGGCKHGVSMERSIPEVSRAISEESWPLKDLSSFTAMDVRDAPVQT
VTETSPGAWLIPDQCYSTQPVDPPYLSRPVAKIGAFRPYNLGHVSEPTQQETPSSVFKPD
STLKALTPESEVFKFADPTCFAAGVPNKCGHGCSSAHKRTRTSLLGPEFNEFEDHPPILS
SSFASLVSEISSIAWMRSGMQSDASSLLQSAPPA
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcgcccgaaactgccgcttcgccggcgccggagccgccatcggatccgcccgcc
gtctccgacgctgcccattccaactccaccccgatggcggtcgagactcaaaccctaacc
gagcctccgccccagccccaatcgcaccaggcctccccgcctccttccggggaggacgac
gacgtggtggttgtctcaggtgcttccgttggtggcgacgccgcggcttccgcggcgtcg
gcgggcaacgcgacgacggaggagagggtgagggggccgtggtccccggaggaggacgcg
gtgctgagcgacctggtggagaagctcggggcgcggaactggactctgatcgcgcgcgga
atccccggccgctccggcaagtcctgccgcctgcgctggtgcaaccagctggatccccaa
gtcaagcgcaagcctttcactgaagaggaggaccgtattataatggctgctcatgctgtc
catgggaacaagtgggcatgtatcgcaaagcttttggatgggagaactgacaatgctatc
aagaatcactggaattccactctgaggcgtcgacactgcaatgatggtggatgcaaacat
ggtgtttctatggagaggagcatcccggaggtgtccagggcaatttcagaagaatcttgg
cctttaaaagatctcagttccttcacagctatggatgtaagggatgctcctgtgcaaaca
gttacggaaacatctcctggggcatggctcatcccagatcagtgttatagcactcagcct
gttgatccgccctacctttctcgaccagttgcaaagattggtgctttcagaccatacaat
ctaggacatgtttccgaacctacccaacaggaaaccccaagttctgtcttcaaacctgac
tcaactcttaaagctttgactcctgaaagtgaggtattcaagtttgctgatcctacgtgc
tttgctgctggggttccaaacaaatgtgggcatggttgcagcagtgcccacaagcggact
cgtacctcattactgggtcctgagttcaatgagtttgaagatcatccgccaattttgagt
agtagttttgcttcactggtttcagaaattagcagcattgcctggatgcgaagtggtatg
caaagtgatgccagtagcttattgcagtcagctccaccagcctga
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