Panicum virgatum (switchgrass): 120676099
Help
Entry
120676099 CDS
T07260
Name
(RefSeq) CCAAT/enhancer-binding protein zeta-like
KO
K14832
ribosome biogenesis protein MAK21
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pvir03009
]
120676099
Ribosome biogenesis [BR:
pvir03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
120676099
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CBF
Cnd1
Condensin2nSMC
TniB
Adaptin_N
Motif
Other DBs
NCBI-GeneID:
120676099
NCBI-ProteinID:
XP_039813260
LinkDB
All DBs
Position
2K:complement(39614247..39626967)
Genome browser
AA seq
1010 aa
AA seq
DB search
MAEPNPKSKRTKKSKKPSAGGGGGEDLDAIKSDVATFASTLGFLPGAGGSSGGFDDSDFR
KSGPMKKPPKPPSEQPQQTPENTANPHQNPKPAKKPHPLELHGPLTATKPGAATTNYPLM
KAAALSGQWYADAGELEARVLGGRKQVPPAVGLQEMQGMVERKRELAEKLMAQYAREYDT
VRRGHGDLKLLEISAKSGTSADKVSAFTCLVEDNPIANMRALDSLLGMVTSKVGKRYAFT
GFDALKELFLVRLLPDRKLKSLIQRPLDILPETKDGYSLLLFWHWEDCLKQRYEKFVMSL
EDAVKDMLPNLKDKAMKTVFILLKSKSEQERRLLTVLVNKLGDPERRAASSAAYLLTCLL
AAHPNMKMVVIDEVDSFLFRPHVGLRAKYQAVNFLSQILLTHKGDGPKIAKRLVDVYIAL
FKVLMSSNDTKGDTSRKYSKKNVENGKIEGGNNKGKDSKSHGNNEESSTAGSDLEMDSRI
LSALLTGVNRALPYVASSEVDDIVEVQTPILFRLVHAENFNVGVQALMLLFQISTKNQIA
SDRFYRALYAKLLSPSAVSSSKPELFLGLLVKAMKNDVMLKRVSAFSKRLLQVALQRPPQ
YACGCLFILSEVLKAKSPLWAIVLQNESVDDGDEHFEDIVESPEDSSVASAALDKHTDKS
ASHEKCNIDAADGSDSVKQMELIERDENGENNASVEASRLHALYDPRHREPSYCNADRVS
WWELTVLASHVHPSVSTMARTLLSGNNIVYSGDPLTDLSLPAFLDKFMEKKPKGNRIAEG
RWHGGSQIAPAKKLDMNHRLIGEELLDLAENEVPPEDIVFHRFYMNKSGPIKPKAKKGSV
LDEDTGELLADNADDAEDGEYDYDDLDSNAFDEEKDLLRDDSDVELDDISDSASMDGSEN
DDDDIDSFTGMDAEALEAEGDSDGNSSDEEMVDAGNGSSSHAKKKMALDKRKNGVKSGRS
PFASLDDYEHLMVGDEDETALKRKRKATGRAGGEKKPKSRSKNKRSRSLK
NT seq
3033 nt
NT seq
+upstream
nt +downstream
nt
atggctgagccgaaccccaaatcgaagcgcaccaagaaatcaaagaagccctcggcggga
ggaggtggcggggaggacctagacgcgatcaagtctgacgtcgccacattcgcctccacc
cttggcttcctgcccggtgccggcggctcctccggcggcttcgatgactccgacttccgc
aagtccggccccatgaaaaaacctccaaaaccaccttcggaacaaccccagcaaacccct
gaaaacacagcaaacccccatcaaaaccctaagcctgccaagaagcctcaccctctcgag
ctacatggtccccttactgccaccaaacctggtgctgccaccacgaattacccgctgatg
aaggcggcggcactctcaggacagtggtacgctgatgctggcgagctagaggcgagggtc
ctgggcggccgtaagcaggtaccgccagctgtagggcttcaggagatgcaggggatggtg
gagcggaaacgggagctggcggagaagctaatggctcagtatgcgagagagtatgacaca
gtgaggcgggggcatggtgacctgaagctcctggagatatcagcaaaatctggcacatca
gctgacaaggtgtctgcgtttacatgtctcgtcgaggacaatccaattgcaaacatgagg
gcgcttgattccctccttggtatggtaacatcgaaagttggtaagaggtatgcgttcaca
ggcttcgatgcattgaaagagttattccttgtgaggttattgcctgatcgtaagttgaaa
agtcttatccagcgcccgctagatattttacctgaaacaaaagatggctactcacttctg
ctcttctggcattgggaggactgtttgaaacagagatatgaaaagtttgttatgtcactg
gaggatgcggttaaagatatgctgccaaatctcaaggacaaagcaatgaagacggttttc
atccttttgaaaagtaaatcagagcaggaacgtcggttacttacagttcttgttaacaag
cttggagatcctgaaagaagagcagcatcgagtgctgcatatctgttaacatgtctactg
gctgctcatcctaatatgaagatggttgtgatagatgaggtggattcttttctcttcaga
ccgcatgttgggcttagggccaagtaccaggctgtcaattttctgagccagattcttctt
acacacaagggagatgggcctaaaattgcaaagcggctggtagatgtctacattgcactg
ttcaaggtactcatgagctctaatgatactaaaggagatacaagcagaaaatacagcaag
aaaaatgtagaaaatggaaaaatagagggaggaaataacaagggtaaggactccaaatcc
catggaaacaatgaagagagttcaacagcaggatcagatttggagatggactccagaatc
ctctctgcacttttgactggtgtaaatagggcattaccatatgttgcgagctcggaagtt
gatgatatagtggaagttcagacacctattcttttcagattggttcatgctgagaatttc
aatgttggagttcaggcgttgatgcttttattccaaatatctacaaaaaatcagatagca
agtgatcgtttctatcgtgcactgtatgcaaagctcttaagtccttctgctgtttcttct
tcaaagccagagttatttcttgggctgttggtgaaagcaatgaagaatgatgtaatgttg
aagagagtatctgcattttcgaagcggctcctgcaggtggctcttcaacggcctcctcaa
tatgcttgtggatgtctgttcattctgtcagaggtccttaaggcaaagtcgccattatgg
gcgattgtgctccagaacgaatctgttgatgatggtgatgagcactttgaagatattgta
gagagtcctgaggactcttctgttgcctcggcagcgctagataaacatactgacaaatca
gcttctcatgagaaatgcaacattgatgctgctgatggttctgatagtgtaaaacagatg
gaattgatagaaagggatgaaaatggtgaaaacaatgcatcagttgaggcgtcgagacta
catgcattatatgatccacgacacagagagccttcttactgcaatgcagatcgtgtcagt
tggtgggagctaacagtattggcttcacatgtgcacccttcagtttctactatggccaga
acattgctatctggcaataatattgtttatagtggtgatccactcacagacctatcactt
cctgccttccttgacaaattcatggaaaagaaaccaaaaggtaaccgcatcgctgaagga
agatggcatggtggatcacaaattgccccagctaaaaagcttgacatgaatcatcgtctc
atcggagaagagcttctggatttggcagagaatgaagtacctcctgaagatattgttttc
caccgtttctatatgaacaagtctggccctattaagcctaaggcaaagaagggttcagtt
cttgatgaagatactggggagctcttagctgataatgctgatgatgctgaggatggagaa
tatgactatgatgaccttgactccaatgcatttgatgaggaaaaggatttacttagagat
gacagtgatgttgagttggatgacatttcagatagcgcttctatggatggatcagaaaat
gatgatgacgacattgatagttttacaggtatggatgctgaagcccttgaggctgagggt
gattcagatggcaactctagcgatgaggagatggttgatgctggtaatggtagtagctcc
catgcaaagaaaaagatggcactggacaaacggaaaaatggtgtaaagagtggccgatct
ccgtttgcaagcctggacgactatgagcatctgatggttggggacgaagatgagacagcg
ttgaagcggaagcggaaagcaacagggagagctggtggtgagaagaaaccaaagtcgaga
tcgaaaaacaagaggtcgaggagtttgaaatga
DBGET
integrated database retrieval system
