Panicum virgatum (switchgrass): 120676112
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Entry
120676112 CDS
T07260
Name
(RefSeq) protein transport protein Sec61 subunit beta-like
KO
K09481
protein transport protein SEC61 subunit beta
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03060
Protein export
pvir04141
Protein processing in endoplasmic reticulum
pvir04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
120676112
04141 Protein processing in endoplasmic reticulum
120676112
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
120676112
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120676112
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pvir02044
]
120676112
Membrane trafficking [BR:
pvir04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
SEC61 complex
120676112
Secretion system [BR:
pvir02044
]
Sec (secretion) system
Eukaryotic Sec-SRP protein
120676112
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec61_beta
Spore_YtfJ
Motif
Other DBs
NCBI-GeneID:
120676112
NCBI-ProteinID:
XP_039813266
LinkDB
All DBs
Position
5N:40028383..40028825
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AA seq
81 aa
AA seq
DB search
MVANGDAPARGSAAAAASLRRRRTTSGAGGGGGGASSMLQFYTDEAAGAKMSPNTVLIMS
IGFIAVVAMLHVFGKLYRTAN
NT seq
246 nt
NT seq
+upstream
nt +downstream
nt
atggtggccaacggtgacgcacctgccagagggagtgcagcagctgctgcaagcctgcgc
aggcgtagaaccacaagtggtgctggtggtggtggaggcggtgccagctcgatgctccag
ttctacactgatgaggctgctggtgctaagatgtccccgaacactgttctgatcatgagc
attgggttcattgccgttgttgctatgctgcatgtttttgggaagctgtaccgcaccgct
aactag
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