Panicum virgatum (switchgrass): 120676380
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Entry
120676380 CDS
T07260
Name
(RefSeq) hevamine-A-like
KO
K01183
chitinase [EC:
3.2.1.14
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00520
Amino sugar and nucleotide sugar metabolism
pvir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
120676380
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.14 chitinase
120676380
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_18
DUF2953
Motif
Other DBs
NCBI-GeneID:
120676380
NCBI-ProteinID:
XP_039813578
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Position
5N:64613272..64614459
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AA seq
299 aa
AA seq
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MAKSFPAMLLVTALALAGLAAGARAGDIAIYWGQNGNEGTLAEACATGNYKFVNVAFLTT
FGKAQTPVLNLAGHCNPATNGCTGVGAEIKSCQSRGVKVLLSIGGGVGSYGLSSPADAGQ
VAAYLWNNYLGGASKSRPLGDAVLDGIDFDIEIGGSLYWDDLARSLKSYSRQGRRPVYLA
AAPQCPFPDASLDTALRTGLFDYVWVQFYNNPPCQYSASAGVGGLARAWAQWTSIRAGRV
FLGLPAAPQAAGSGFVPTSDLVSQVLPVVRNSTKYGGIMLWSRFYDGLTGYSDAVKSQV
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaatcttttccggcaatgctgctggtcacggcgctcgcgctggcggggctagcc
gccggagcgcgcgccggcgacatcgcaatctactggggccagaacggcaacgagggcacg
ctggcggaggcgtgcgccaccggcaactacaagttcgtcaacgtggccttcctcaccacg
ttcggcaaggcccagacgccggtgctcaacctggccggccactgcaacccggccaccaac
ggctgcacgggcgtgggcgcggagatcaagtcgtgccagagccggggcgtcaaggtcctg
ctctccatcggcggcggcgtcggcagctacggcctgtcgtccccggccgacgccgggcag
gtcgccgcctacctctggaacaactacctcggcggcgcgtccaagtccaggcccctcggc
gacgcggtcctcgacgggatcgacttcgacatcgagatcggcgggagcctgtactgggac
gatctggcccggtccctcaagtcctactcccgtcaggggcgccggccggtgtacctcgcc
gcggcgccgcagtgcccgttcccggacgcgtcgctggacaccgcgctgcgcacggggctg
ttcgactacgtgtgggtgcagttctacaacaacccgccgtgccagtacagcgcgagcgcc
ggcgtgggcggcctggcgcgcgcgtgggcgcagtggacgtcgatcagggcggggcgggta
ttcctggggctcccggccgcgccccaggccgccggcagcgggttcgtgccgacgagcgac
ctggtatcgcaggtgctccccgtggtcaggaactccaccaagtacgggggcatcatgctg
tggtcgaggttctacgacgggctcaccgggtacagcgacgcggtcaagtcccaagtgtga
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