Panicum virgatum (switchgrass): 120676487
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Entry
120676487 CDS
T07260
Name
(RefSeq) non-specific phospholipase C6-like
KO
K01114
phospholipase C [EC:
3.1.4.3
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00562
Inositol phosphate metabolism
pvir00564
Glycerophospholipid metabolism
pvir00565
Ether lipid metabolism
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00562 Inositol phosphate metabolism
120676487
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
120676487
00565 Ether lipid metabolism
120676487
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02042 Bacterial toxins [BR:
pvir02042
]
120676487
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.3 phospholipase C
120676487
Bacterial toxins [BR:
pvir02042
]
Type II toxins: Membrane damaging toxins
Toxins that enzymatically damage the membrane
120676487
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Gene cluster
GFIT
Motif
Pfam:
Phosphoesterase
Motif
Other DBs
NCBI-GeneID:
120676487
NCBI-ProteinID:
XP_039813732
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Position
5N:12287869..12290640
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AA seq
523 aa
AA seq
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MATGSPRRQPLLLLLLLILLADSGEASAARPSPIKNVVVLALENRSFDHMLGWTRRLLGL
PVDGLTGAECNPNSSSPSAANSSSSICVSADADLVVPDDPGHSFEDVLEQVFGNISGAAA
QPSMSGFVRSALSVNALLSSAVMRAFRPALLPAFSALAPAFAVFDRWFSSIPGPTQPNRL
FLYSATSRGAVAHDKLDLLLGYPQRTIFDSLAADGRGFAVYFKTIPTVLFYRRLRALRHA
ARSFHRYDAAFKDHARRGVLPALSVIEPRYFDLTGTPADDDHPAHDVANGQRLVKDVYEA
LRASPQWNQTLLIVTYDEHGGFYDHVATPTAGVPSPDGIRGPPPFFFKFDRLGVRVPTIM
VSPWIKKGTVVSRPVGPTDTSEFEHSSIPATLKKIFNLSSDFLTKRDAWAGTFEHIFTEL
DEPRTDCPETLPEVPFERPTPPKEHGWLSDFQRELVELASFLNGDYMLTSLAQEARTKTM
TVKQADAYVRRAITGFLQASKQAVRLGANESAIVTMRPSLTSN
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgggatcgccgcggcggcagcctctcctcctcctcctcctcctgatcctcctc
gccgacagcggcgaggccagtgccgcccggccgagcccgataaagaacgtggtggtgctg
gcgctggagaaccggtcgttcgaccacatgctggggtggacgcgccgcctgctggggctc
cccgtcgacgggctcaccggcgccgagtgcaaccccaactcctcctccccctccgccgcc
aacagctcctcctccatctgcgtgtccgccgacgccgacctcgtggtccccgacgacccg
ggccactccttcgaggacgtcctggagcaggtcttcggcaacatctccggcgccgccgcg
cagccctccatgtcgggcttcgtccgcagcgcgctctccgtcaacgcgctgctctcctcc
gccgtcatgcgcgccttccgccccgccctcctcccggccttctccgcgctcgccccggcc
ttcgccgtcttcgaccgctggttctcctccatcccggggcccacgcagcccaaccggctg
ttcctctactccgccacctcccgcggcgccgtcgcgcacgacaagctcgacctcctcctc
ggctacccgcagcgcaccatcttcgactcgctcgccgccgacggccgcggcttcgccgtc
tacttcaagaccatccccaccgtcctcttctaccgccgcctccgcgcgctccgccacgcg
gcgcgcagcttccaccgctacgacgccgccttcaaggaccacgcccgccgcggcgtgctc
ccggcgctctccgtcatcgagcccaggtacttcgacctcacggggacccccgccgacgac
gaccacccggcgcacgacgtcgccaacggccagcgcctcgtcaaggacgtgtacgaggcg
ctccgggccagcccgcagtggaaccagacgctgctcatcgtcacctacgacgagcacggc
gggttctacgaccacgtcgccacgcccaccgccggcgtgcccagccccgacggcatccgg
ggcccgccgccgttcttcttcaagttcgaccgcctcggcgtcagggtgcccaccatcatg
gtctcgccgtggatcaagaagggcaccgtcgtcagccgccccgtcgggcccaccgacacc
tccgagttcgagcactcctccatcccggccaccctcaagaagatcttcaacctctcgtcg
gatttcctcaccaaacgggatgcgtgggccggcacattcgagcacatcttcactgagctc
gacgaaccaagaacagactgcccagagacattgccagaggtgccattcgagaggccgacc
cctcccaaagaacacggctggctctcggatttccagcgcgagcttgtggagctcgcgagc
ttcctgaacggcgactacatgctgacgagcctcgcgcaggaggcccggacgaagacgatg
acggtgaagcaggccgacgcgtacgtgcggcgagccatcacgggctttctgcaggcgagc
aagcaggcggtgcggctgggcgcgaacgagtccgccatcgtgaccatgaggccgtctctc
acaagtaactaa
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