Panicum virgatum (switchgrass): 120676711
Help
Entry
120676711 CDS
T07260
Name
(RefSeq) probable calcium-binding protein CML41
KO
K13448
calcium-binding protein CML
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
120676711
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_7
EF-hand_8
EF-hand_6
EF-hand_1
EF-hand_5
EF-hand_9
Motif
Other DBs
NCBI-GeneID:
120676711
NCBI-ProteinID:
XP_039813971
LinkDB
All DBs
Position
5N:complement(58294008..58295198)
Genome browser
AA seq
215 aa
AA seq
DB search
MAGIEVSRPSKRLSPKRSGSFKLSLPGLFCGPCKATAVASPPDSPTGGGGSGARSLSSSC
ASASALSSGTSRGRDRMAELREIFRHFDRDMDGRISGRELRELFASMGDGVLAALGQGLG
LDGGEDLMLGFDDFVRIVESKGGEEEEREDLRRAFEAFEAVKGSGRITPRGLQRVLSQLG
DEPSAAECEAMIRAYDDDGDGELDFHDFHRMMSQD
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcatcgaggtgtccaggccgtcgaagcggctgtccccgaagcgcagcggcagc
ttcaagctgagccttcccgggctgttctgcggcccgtgcaaggcgacggcggtggcgtcg
ccgccggactcccccacgggcggcggcgggtccggcgcgcggtctctgtcgtcgtcgtgc
gcgtcggcgtcggcgttgtcctcgggcacgtcccgcgggcgcgaccgcatggcggagctc
cgcgagatcttccgccacttcgaccgcgacatggacgggcgcatctcggggcgggagctg
cgcgagctgttcgcgtccatgggcgacggcgtgctggccgcgctcgggcaggggctgggg
ctggacggcggcgaggacctgatgctggggttcgacgacttcgtgcgcatcgtggagagc
aagggcggcgaggaggaggagcgcgaggacctgcgccgcgccttcgaggcgttcgaggcc
gtcaaggggtccggccggatcacgccccgggggctgcagcgcgtgctcagccagctgggc
gacgagccctccgcggccgagtgcgaggccatgatccgcgcctacgacgacgacggcgat
ggcgagctcgacttccacgacttccaccgcatgatgagccaggactag
DBGET
integrated database retrieval system
