Panicum virgatum (switchgrass): 120676805
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Entry
120676805 CDS
T07260
Name
(RefSeq) hydroxyproline O-arabinosyltransferase RDN2-like
KO
K20782
hydroxyproline O-arabinosyltransferase [EC:
2.4.2.58
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00514
Other types of O-glycan biosynthesis
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
120676805
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pvir01003
]
120676805
Enzymes [BR:
pvir01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.58 hydroxyproline O-arabinosyltransferase
120676805
Glycosyltransferases [BR:
pvir01003
]
O-Glycan biosynthesis
O-linked Ara type
120676805
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HPAT
Motif
Other DBs
NCBI-GeneID:
120676805
NCBI-ProteinID:
XP_039814065
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All DBs
Position
5N:complement(14909587..14912427)
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AA seq
375 aa
AA seq
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MNAAARKAAAGGGMGRAPALVLALVAAGAFLISYNFFAMLLRGGGVGAGAAAGARDPVVP
MPAWMREAAGREARRRPFHVALTATDAAYSRWQCRVMYYWYKRMQAQPGGEAMGGFTRVL
HSGKPDGLMDEIPTFVVDPLPAGKDHGYVVLNRPWAFVQWLQKAKIEEEYILMAEPDHIF
VKPLPNLANDNEPAAFPFFYITPSEHEKIVRKYYPKERGPVTDIDPIGNSPVIIKKTLLE
KIAPKWMNVSIQMKEDEETDKTFGWVLEMYAYAVASALHGVQHILRKDFMVQPPFDTKLG
STFIIHFTYGCDYSLKGELTYGKIGEWRFDKRSFQNGPPPRNLTLPPPGVPESVVTLVKK
VNEASANLPRWDDGI
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcggcggcgcggaaggccgctgccggcggcggcatggggcgcgcgccggcgctg
gtgctggcgctggtggcggcgggggcgttcctgatctcctacaacttcttcgccatgctg
ctccgcggcggcggagtcggcgccggcgcggcggcgggggcgagggacccggtggtgccg
atgccggcgtggatgcgcgaggcggcgggccgcgaggcgcggcggcgcccgttccacgtg
gcgctcacggccacggacgcggcctacagccggtggcagtgccgggtcatgtactactgg
tacaagcggatgcaggcgcagccgggaggggaggccatgggcgggttcacgcgcgtgctg
cattcggggaagcccgacgggctcatggacgagatccccaccttcgtcgtcgacccgctg
cccgccggcaaggaccacggatatgtggtcctgaataggccatgggcatttgtgcagtgg
cttcagaaagcaaaaattgaagaagagtatatactaatggcagagccagatcatatattt
gtcaaacctttaccaaatttggccaatgataacgagccggcagcattccccttcttttac
attacaccatcagaacatgaaaaaattgtaaggaaatactatcctaaagaaagaggtccc
gtcacagatatcgatcctattgggaattctcctgtaatcattaagaagacactgcttgag
aagattgccccaaaatggatgaatgtgtcgatacaaatgaaagaggatgaggagacagat
aaaacatttggttgggttttggaaatgtacgcatatgctgttgccagtgcattgcatggt
gttcagcatatccttcgcaaagacttcatggttcagccaccatttgatacgaagcttggg
agcacatttatcatccatttcacttatggatgtgattattcactcaagggtgaactgacc
tatgggaaaattggtgaatggcgatttgacaaacggtcattccaaaatgggccaccacca
aggaatctgacgttgccccctcctggagtaccagaaagtgtggttacactagtaaaaaag
gtcaatgaagctagcgcaaaccttcctcgctgggatgatggaatataa
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