Panicum virgatum (switchgrass): 120676871
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Entry
120676871 CDS
T07260
Name
(RefSeq) eukaryotic translation initiation factor 3 subunit A
KO
K03254
translation initiation factor 3 subunit A
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
pvir03012
]
120676871
Translation factors [BR:
pvir03012
]
Eukaryotic type
Initiation factors
eIF-3
120676871
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eIF3a_PCI_TPR-like
PCI
Motif
Other DBs
NCBI-GeneID:
120676871
NCBI-ProteinID:
XP_039814138
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Position
5N:10212659..10220352
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AA seq
989 aa
AA seq
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MATFAKPENALKRAEELIHVGQKQAALQALHDLITSKRYRSWQKPLEKIMMKYVELCVDL
RKGRFAKDGLIQYRIVCQQVNVSSLEDVIKHFMQLSNEKAEQAKSQAEALEDALDVEDLE
ADKRPEDLMLSFVSGEKGKDRSDKEVVTPWFKFLWETYRTVLEILRNNSKLEALYAMTAH
RAFQFCKQYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLTAPESLQLYLDTRVEQLKV
ATELSLWQEAFRSVEDIHGLMSMVKKMPKPSVLVVYYAKLTEIFWISDSHLYHAYAWLKL
FNLQKSYNKNLSQKDLQLIASSVSLSALSVAPYDQKYGASHLETENEKERNLRMANLVNF
SLDSKRENRELPSRASLLSELVSKGVLSCASQEVRDLYNLLEHEFLPLDLASKVQPLLSK
ISKIGGKLSSASSVPEVKLSQYISALEKLTTLRVLQQVSQIFQSMKIDMLSRMIPFFDFA
VVEKISVDAVKRNFVAIKVNHLSGAVHFCTVDIESDGLSEHLSILADSLNKARNQIRPPV
KKPSKLGESLSSLAGIVENEHRRLLARKSIIEKRKEDLERQILEKEKEEESKRAILQIKN
ANDERIRLLNEQKQREQERIRREIEEKNKAEARKLLEDLTKKAGKKHVVVEGELTKEAIM
ELALSEQLKERQEMEKKLQKLAKTMDYLERAKRQEEAPLIEQAFQKRLEEEKILHEQEQL
REIELSKQHHAGDLQEKNRLSRMLEHKNAFQERIVQRREAEFGRLKKERDERINQLISSR
KRERETVRKLMYYLNLEEQRIERLREEEEARKREEEEKRKREEAERKAKLDAIAAKQRQR
EIELEEKEKARKEQLLRGSEAARVTEAAPVAQPPREAAASVPVAVAAVSPASSKYVPKFK
RGGDSSGSSSSAGGSQRPADVRTREDDRWGSRDERSRPDVRPLRQDGPPARQDAPPAHPD
GPPATDRWRGSRFSSSSSSSSSTWGRPRN
NT seq
2970 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccttcgcgaaacccgagaacgccctgaagagagctgaagagttgattcatgtt
gggcaaaaacaggcggcgctgcaggctttacatgatctcattacctcaaaaaggtacagg
tcatggcaaaagcctctcgaaaagatcatgatgaagtatgtagagctatgtgttgacttg
aggaagggaagatttgcaaaagatggccttattcagtatagaattgtctgccagcaagta
aatgtgtcttccttggaagatgtcatcaagcattttatgcagctttccaatgagaaagct
gaacaagctaagagccaggcagaagccctggaagatgctctggatgtcgaagatctggaa
gcagataagcgtcctgaggacctgatgctcagttttgttagtggggagaaaggaaaggac
cgatcggacaaagaagttgttactccatggttcaagttcctctgggagacataccggact
gtgcttgagatactaaggaacaattcaaagcttgaagcgttgtatgctatgactgctcat
agggcttttcagttttgtaagcagtataagagaactactgaattccgtaggttgtgtgag
attatcagaaaccatcttgccaatctcaacaagtatcgtgatcaaagagatcgtcctgat
ctgactgcacctgaaagcttacaactgtatcttgatacacgggtcgagcaacttaaagtc
gcgaccgagctttccctttggcaggaagccttccgatcggtggaggatatccatggtttg
atgagtatggtgaagaaaatgccaaagccttctgttttggttgtatattatgccaagtta
actgaaattttctggatatctgatagccacctttatcatgcatatgcatggctcaaactt
ttcaacttgcaaaagagctacaataagaacttgtctcagaaggatctacaattaatagca
tcttctgtctcactctctgcgctatctgtggcaccttatgaccagaagtatggtgcatct
catcttgagacagaaaatgagaaggaacgtaacttgaggatggcgaaccttgtcaacttt
tcacttgattccaagcgtgaaaatcgagaattgccttcaagagcatctcttctatcagag
ttggtgtcaaaaggggtgctttcatgtgcttcccaagaagtgcgagatctgtacaacctt
ttggaacatgagttcctacctctggaccttgcatcaaaggtgcagccacttctttcaaag
atttcaaagattggagggaagctttcatcagcttcttccgttccagaggttaagttatct
cagtacatttctgcattggagaagctgacaacactgagagtgctgcaacaggtgtctcag
attttccagtccatgaaaatcgatatgctctcaagaatgatcccgttctttgattttgct
gttgtggagaagatttctgttgatgctgtgaaacgcaattttgttgcaataaaagttaat
catttatcaggagctgttcatttttgtactgtggacatcgaatctgatggattaagtgaa
cacctcagcattctggctgattctttaaataaggcgaggaatcaaattcgtccaccagtt
aaaaaaccatctaaactcggtgaaagtctcagtagtttagctggaatagtggagaatgaa
cacaggaggcttcttgcaagaaaatccatcattgagaagcgtaaagaagaccttgaacgc
caaatattggagaaggaaaaagaggaggaatcaaagagagccattctgcagataaaaaat
gcaaatgatgaaaggattagactcctcaatgaacaaaagcagagggagcaggagagaatt
cgtagagaaatagaggaaaaaaataaagcagaagcaagaaagttgctagaagacttgaca
aagaaagctgggaaaaagcatgttgttgttgaaggggagcttaccaaggaggccatcatg
gaattggcattgagtgaacagttgaaggagcgtcaggaaatggagaaaaaactacagaag
cttgcaaaaacaatggattatctggaaagagcgaaaaggcaggaagaggcaccattaatc
gagcaagctttccaaaaacgccttgaggaagagaagatccttcacgagcaagagcagctg
cgggagattgaactcagcaaacaacaccatgcgggtgacttgcaagagaaaaatagactt
tctcgaatgttggaacacaagaatgctttccaggaaagaatcgtgcagcgccgtgaagct
gagtttggtcgtctgaagaaagagagagatgaacggatcaaccagttgatatcatcaaga
aagcgtgaaagggagacagttaggaaattgatgtattatctgaacctggaggaacagagg
attgaaaggctccgtgaggaggaggaagctaggaaacgtgaagaggaagaaaagaggaag
agagaagaggccgagaggaaagctaagcttgatgctattgcagccaaacagcgacagaga
gagatagagttggaagaaaaggaaaaggcgcggaaggaacagctcttaagaggatccgag
gctgcgcgtgttactgaggctgcccctgttgcacagccacctcgcgaggcagcagcctct
gttccagtagcagtcgccgccgtctctccagcttctagcaaatatgttcccaagtttaaa
cgtggcggcgatagcagcggcagcagcagcagtgctggtggcagccagagaccagctgat
gtgcgtacacgcgaagatgaccgttggggttcacgtgatgagcgttctcgcccagatgtg
cgtccccttcgccaagatggccctcctgcacgacaggacgcacccccagctcacccggat
ggccctccagctactgaccgttggcgtgggtcaagattttcctccagctcttcgtcctct
tcatcgacctgggggaggccgcggaactga
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