Panicum virgatum (switchgrass): 120676936
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Entry
120676936 CDS
T07260
Name
(RefSeq) probable ubiquitin-like-specific protease 2A
KO
K08596
sentrin-specific protease 7 [EC:
3.4.22.68
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pvir01002
]
120676936
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120676936
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.68 Ulp1 peptidase
120676936
Peptidases and inhibitors [BR:
pvir01002
]
Cysteine peptidases
Family C48: Ulp1 endopeptidase family
120676936
Ubiquitin system [BR:
pvir04121
]
Deubiquitinating enzyme (DUB)
UBL-specific proteases (ULPs)
120676936
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C48
Motif
Other DBs
NCBI-GeneID:
120676936
NCBI-ProteinID:
XP_039814217
LinkDB
All DBs
Position
5N:complement(64172259..64191815)
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AA seq
1084 aa
AA seq
DB search
MNHAEVSGLLSVGMHETDGGEESYAIEYPKMDQDTSHETTKFDVVMATSALYTGNINTNA
CLDEYHMSGIQSMEEIKFGNEQPFELPSKEMVVDSEEESMPSSPDTSSTGYMEQNLQHMY
DAMVDKERPVVLSPAFITCDKTLHLEPHLTFSFNGIKIEYLDLNSFEDEKMIALQWEISN
IISISCKWAQNVGSAFITLLAGPKAETGNADPVRVQFCLDDSQWPRRQQKIWELGPRYQE
IWKEIPLDDFTSEDWSIEPSLFFPRQYFSSTDDFEDIIYPQGDPDAVSISKRDVELLLPE
TFVNDTIIDFYIKYLTTRIESTEKCRFHFFNSFFFRKLADLDKDQGRAPEGRAAFLRVRK
WTRKINVFEKDFLFIPVNYNLHWSLIVICYPGEVATFKDVDTKLSAKVPCILHMDSLKGS
HTGLKDIIQSYLWEEWKERHPESASDNSDKFLNLRFVSLELPQQDNSFDCGLFLLHYVEL
FLMDAPRNFNPLKIDVFSGFLTGDWFAPAEASLKRSVVRKLIHEVVTGSFQNHPKLACGG
EQLDERHQRCSDAEQESANEFLAQRCTAGDPETVCTGHDGTHEIQPSKSICLNDSEEKGL
PVSGCMLDTGKVSIVDAQNPQESEVYAPDKYNVCLSSQAEKNEPVIAEPNNQLNMTSCAP
GQDEVLKGSNCVVTDKEHGESLFASLDDNQKVSSKTEVEMQDIMVSTSCSISEVTAQVIA
YQEHSFQRSADVGDECFRPSQDVVSVMTLDSSKVDDGPNPERNAAEGDCGDHHEYTDSVM
LGDINKDVADTKCEDNLVDPITAESAIIENVKENSTTDPVTVENAIIENVKDISTTADRV
NHGELYVSSQLPDGNTDSGMTGGGSESKLGSPDNGMTGVSTVPSDLKEQNIDKVVAGDCT
HQSNINVKDRSELEVGNTGNSMTGGNTVSSVMNEGNTDQIIPGGCTNATDANADGEGADN
YNYSARDSAVPCEDETTCTDGVIVSMDVPCRTTNETVLEDKSSDAKRPLPHGTCELVDSD
RPCMPKNETSENTFLDGKRPAPDGTCEENDDGQGTDAKIQRHYKRRKVRALEKQQSFSDA
SSLG
NT seq
3255 nt
NT seq
+upstream
nt +downstream
nt
atgaatcatgctgaagtctctggtttgttaagtgttggtatgcatgaaacggatgggggt
gaagaatcatatgcaattgaatatcctaaaatggatcaggatacttcccatgaaacaacc
aaatttgatgtagtaatggcaacttcagcattgtatactggtaatatcaataccaatgct
tgcttggatgaatatcacatgtcaggaattcagtctatggaggaaattaaatttggcaat
gaacaaccctttgagcttccatcgaaagaaatggtagttgattctgaggaagaaagcatg
ccatctagccctgacacttcgtctaccggttacatggagcaaaatctgcaacatatgtat
gatgcgatggttgacaaagaacgaccagttgtgcttagtcctgcctttataacatgcgac
aaaactttgcatcttgagcctcaccttactttctcattcaatgggatcaaaattgagtat
ttggatttaaattcctttgaagatgagaagatgatagctttacaatgggaaatctcaaat
attatttccatcagttgtaaatgggctcagaatgttggatctgccttcataacactcctt
gctggacccaaagcagaaactggaaatgcagatcctgttagagtacaattttgtcttgat
gattcacaatggccaaggagacaacagaagatttgggaacttggaccaagatatcaagaa
atatggaaagaaatcccattagatgattttacatcggaggattggagcattgaacccagt
ctgtttttccctaggcaatacttttcaagcactgacgactttgaagatattatctatccc
caaggagatcctgatgctgtttccattagcaaaagagatgttgagctccttcttcctgaa
acctttgtcaacgatacaataattgacttttatatcaaatacttgaccacaagaattgaa
tctaccgagaagtgcaggttccacttctttaatagcttcttttttcgcaagctggcggat
cttgacaaagatcaggggagagctccagaaggtagagcagccttcttacgtgttcgcaaa
tggacccgcaaaataaatgtatttgagaaggattttctgtttattccagtcaactacaac
ttgcattggagcttaattgttatttgctatcctggagaagtggcgacatttaaagatgta
gatacgaagctctcagctaaagttccatgtattttacacatggattcacttaaaggaagt
catactggactcaaggacatcattcaaagttatttatgggaagagtggaaggaaaggcac
cctgaatcagcatcagataattcggacaaattcttgaacttgagatttgtttcccttgag
ctccctcaacaggataattcatttgattgcggcttgttcttgctccattatgtggaacta
tttttgatggatgctccaaggaacttcaacccactgaagattgatgtattttctggcttt
cttactggtgattggtttgcacctgctgaagcttctctcaagcgatctgttgtccgaaag
ttaattcatgaggtggtgacaggatcttttcagaatcaccctaagctagcttgtggcggt
gagcagcttgatgaaagacatcaaagatgctcagatgctgagcaggaatcagctaatgag
tttcttgctcagaggtgcactgctggtgaccctgaaacagtttgcacaggtcatgatggc
actcatgaaatacagccatccaagtccatctgtttaaatgattccgaagaaaaggggttg
ccagtttctgggtgcatgttggacactggaaaggtttcaattgttgatgcacagaatcca
caagagtctgaggtgtatgcaccagacaagtataatgtttgcctgtcaagccaggccgag
aaaaatgagccagttattgcagaacctaacaatcaacttaatatgacatcatgtgcccca
ggacaagatgaagtgctcaagggatcaaattgtgtggtaacagataaagaacatggagaa
tctttgtttgcttctttggatgataaccaaaaagtttccagtaaaacagaagttgagatg
caggacattatggtttccacgagctgctcaatctctgaagttactgctcaggtaattgcc
tatcaagaacattcttttcaaagaagtgcagacgttggggatgagtgctttagaccttct
caagatgtggtttctgtcatgacgctcgactccagcaaagttgacgatggaccaaatcca
gaaagaaatgcagctgaaggtgattgtggtgaccatcatgaatatacagattcagtcatg
ctaggcgatatcaacaaagatgttgctgatacgaagtgtgaagataatcttgtggatcct
ataacagcagaaagtgctatcatcgagaatgtgaaggaaaacagcacaaccgatcctgta
acagtagaaaatgccatcatcgaaaatgtgaaggatattagtacaactgcagacagagtc
aatcatggtgagctgtatgtttcatctcagttgccagatggaaacactgacagtggtatg
actggtggtggttctgagtcgaaattaggaagccccgataatggtatgactggtgttagc
acagttccctctgacttgaaagagcaaaatattgacaaagtagtggcaggcgactgtaca
catcaaagtaacataaatgtcaaggataggtctgagttggaagtgggaaatactggcaat
agtatgactggtggtaatacagtttcctctgtcatgaatgagggaaacactgaccaaata
ataccaggtggttgtacaaatgcaactgatgcaaatgctgatggtgagggtgctgacaat
tacaattactcagcaagggacagtgcagttccttgtgaagatgagacaacctgcactgat
ggtgtgattgtatccatggatgtgccctgcaggactaccaatgaaacagttttggaggac
aaatcttccgatgcaaaaaggcctctgcctcatggcacctgcgaacttgttgatagtgat
agaccttgcatgccgaagaatgaaacgtcagagaacacatttcttgatggtaagaggcct
gcgcctgatggcacctgcgaagagaatgatgatggtcagggtactgatgcaaaaatacag
aggcattacaagcgacggaaggttcgggccttagagaaacagcaaagcttctcggatgcc
tcatctttaggttag
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