Panicum virgatum (switchgrass): 120677228
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Entry
120677228 CDS
T07260
Name
(RefSeq) MYB-like transcription factor ODO1
KO
K09422
transcription factor MYB, plant
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120677228
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
120677228
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GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
DUF7159
Motif
Other DBs
NCBI-GeneID:
120677228
NCBI-ProteinID:
XP_039814311
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All DBs
Position
6N:37874931..37876616
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AA seq
319 aa
AA seq
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MGRQPCCDKVGLKKGPWTAEEDQKLVSFILGNGQCCWRAVPKLAGLLRCGKSCRLRWTNY
LRPDLKRGLLSDAEEKLVIDLHAQLGNRWSKIASHLPGRTDNEIKNHWNTHIKKKLKKMG
IDPLTHKPLPPPPQQQEHQPIPPPAGGSPEAQPSPPPERCPAEEKAVPVAATATATATSS
SEDGDGSELLLSKSPGFCTDEVPMMHPDEIMVSMRDQPPPLPASACVPAAAAAVSTPPTS
YSTSASSSCLSRDEESPFAFMDMDMELPEFVLQMGLDDVDARWRDCMLPLPLPLSPSPVF
EDPFDSFQFQRNGALFSSY
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggggaggcagccgtgctgcgacaaggtggggctgaagaagggcccgtggacggcggag
gaggaccagaagctcgtcagcttcatcctcggcaacggccagtgctgctggcgcgccgtg
cccaagctcgccgggctgctccggtgcgggaagagctgccggctgcggtggacgaactac
ctgcggccggacctcaagaggggcctgctctccgacgccgaggagaagctcgtcatcgac
ctgcacgcccagctcggcaacaggtggtcgaagattgcgtcacacttgccggggcgaacg
gacaacgagatcaagaaccactggaacacccacatcaagaagaagctcaagaagatgggg
atcgaccccctcacgcacaagcccctcccgccgcctccgcagcagcaggagcaccaaccg
attccaccgcccgctggcggctcgccggaggcgcagccatcgccacctccggagcggtgt
cctgcagaggagaaggcggtgccggtggcggcgacggcgacggcgacggccacaagtagt
agcgaggacggcgacggcagcgagctgctcctcagcaaatcccccggcttctgcaccgac
gaggtgccgatgatgcacccggacgagatcatggtgtccatgcgcgaccagccgccgcca
ttaccagcctcggcttgcgtccccgccgcagccgccgcggtctcgacgccgccgacgtcc
tactccacctcggcgtcgtcgtcctgcctgagccgcgacgaggagtcgccgttcgcgttc
atggacatggacatggagttgccggagttcgtgctccagatggggctagacgacgtggac
gcgcggtggcgcgactgcatgctgccgctgccgctgccgctgtcaccatcgccggtcttc
gaggaccccttcgattctttccagttccagaggaatggcgctctcttctctagttattag
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