Panicum virgatum (switchgrass): 120677242
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Entry
120677242 CDS
T07260
Name
(RefSeq) transcription factor MYB93-like
KO
K09422
transcription factor MYB, plant
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120677242
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
120677242
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Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
120677242
NCBI-ProteinID:
XP_039814323
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All DBs
Position
6N:complement(45100149..45101910)
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AA seq
321 aa
AA seq
DB search
MGRSPCCDESGLKKGPWTPEEDEKLQQYIQKNGHGSWRTLPRLAGLNRCGKSCRLRWTNY
LRPDIKRGKFSQEEEQTILHLHSILGNKWSAIATHLPGRTDNEIKNFWNTHLKKRLIQMG
FDPMTHRPRTDFFAALPQLIALAALRDQLAADPAASAQLQAGGGGDVAIQAAKLQYLQCL
LQSAATTIDGFASTAAAAGSTPNAAEAAALDALCSPQGTQDSTAPVSAASDQLLPSCTFP
EAPASSEANQGLGYGGADVDVFACHGGASLPPLADLSDAANNPSSADGCSATASSSFGGS
AGSPLPWPEFFPDDPFITDFL
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atggggagatctccttgctgcgacgagagtggcctcaagaagggcccgtggacgccggag
gaggacgagaagctgcagcagtacatccagaagaacggccatggcagctggaggaccctc
ccaagactcgccgggctgaacagatgcggcaagagctgccggctgcggtggaccaactac
ctgcggccggacatcaagcggggcaagttctcgcaggaggaggagcagaccatcctgcac
ctccactccatcctcggcaacaagtggtcggcgatcgcgacgcacctgccgggccggacg
gacaacgagatcaagaacttctggaacacgcacctcaagaagcggctcatccagatgggc
ttcgaccccatgacgcaccgcccccggaccgacttcttcgccgcgctgccgcagctcatc
gcgctcgccgcgctccgcgaccagctcgccgcggacccggcggcgagcgcgcagctgcag
gccggcggcggcggcgacgtggccatccaggccgccaagctccagtacctgcagtgcctt
ctccagtccgcggccaccaccatcgatggcttcgcctccaccgccgccgccgcgggttcc
acgcccaacgccgccgaggcggcggctctcgacgctctgtgctcgccgcaggggacgcaa
gacagcaccgccccggtgtccgcggccagcgaccagctgctaccttcctgcacgttcccc
gaggcgcccgccagcagcgaagccaaccaaggcctcggctacggcggcgctgatgtcgac
gtgttcgcgtgccacggtggcgcctcgctgccgcccctcgccgacctctccgacgccgcg
aacaacccctcatcagccgacgggtgcagcgccacggcgtcgtccagcttcggtggcagc
gcgggcagcccgctcccttggccggagttcttccccgacgaccccttcatcaccgatttc
ctatga
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