Panicum virgatum (switchgrass): 120677266
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Entry
120677266 CDS
T07260
Name
(RefSeq) protein DETOXIFICATION 27-like
KO
K03327
MATE family, multidrug and toxin extrusion protein
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvir02000
]
120677266
Transporters [BR:
pvir02000
]
Solute carrier family (SLC)
SLC47: Multidrug and Toxin Extrusion (MATE) family
120677266
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GFIT
Motif
Pfam:
MatE
Motif
Other DBs
NCBI-GeneID:
120677266
NCBI-ProteinID:
XP_039814347
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Position
6N:44580078..44589776
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AA seq
484 aa
AA seq
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MEAPAAGAPLLLQRGDGVITTTAKGRARRAAAEWWAESKKLSRIVGPAIFQRIALYGINV
VSQAFIGHLGDLELAAFSIAATVVAGFNFGFLLGMASALETLCGQAFGAKKYHMLGVYLQ
RSWIALLLFAVALTPTYILMEDLLLLIGQSPELARLAGKMSVWLIPQHFAVAMLVPLTRF
LQSQLKNWVTAVTAGVTLAIHVVATYLLVQRFQLGIVGAVVAADLSWWLVVLGQFLYVVG
GGCPLSWKGFSTEAFADFWEFVKLSSASGVMLCLENWYYRVLILLTGYLKNAEIAVDALS
ICLTINGWEMMIPLGFLAATGVRVANELGAGSGKGARFAIVVSITTSVLIGLFFWCVILY
FNDQLALLFTSSEVVLAAVHSLSVLLAFTVLLNSVQPVLSGVAVGSGWQALVAYVNIGSY
YLVGIPLGVVLGWPLRFGVGGIWSGLIGGTAVQTLVLAYLTARCDWDEEANKASTRMRVW
ASSK
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgccggcggcgggggcgccgctgctgctgcagcgcggcgacggggtgatcaca
acgacggccaaggggcgcgcgaggcgggcggcggcggagtggtgggcggagtcgaagaag
ctgtcgcgcatcgtggggccggccatcttccagcggatcgcgctgtacgggatcaacgtc
gtctcgcaagccttcatcggccacctcggcgacctcgagctcgccgccttctccatcgcc
gccaccgtggtcgccgggttcaacttcggattcctgctgggcatggcgagcgccctggag
acgctgtgcgggcaagcgttcggcgccaagaagtaccacatgctgggcgtgtacctgcag
cgctcgtggatcgcgctgctcctcttcgccgtggcgctgacgcccacctacatcctcatg
gaggacctgctgctgctgatcgggcagtcccccgagctggcgcgcctcgccggcaagatg
agcgtctggctgatcccgcagcacttcgccgtggcgatgctggtcccgctcacccggttc
ctgcagagccagctcaagaactgggtgaccgcggtcaccgccggcgtcacgctcgccatc
cacgtcgttgcgacctacctgctcgtgcagcgcttccagctcgggatcgtcggggcggtc
gtcgccgcggacctgtcgtggtggctcgtcgtgctgggccagttcttgtacgtcgtcggc
gggggatgcccgctgtcttggaaggggttctcgacggaggcgttcgccgacttctgggag
ttcgtcaagctctcctcggcctccggagtgatgctctgcttggagaactggtactacaga
gtgttgatattgctaacagggtacctgaagaacgcagaaatcgctgtcgacgcactctcc
atatgcctgacgattaacggatgggagatgatgatcccattgggcttcctggcagcaaca
ggcgtgcgggtggcaaacgagctcggcgccgggagcggcaagggcgcgcgcttcgccatc
gtcgtctccatcacgacctccgtgctgatcgggctcttcttctggtgcgtgatactctac
ttcaacgaccagttggcgctcctcttcacgtccagcgaggtcgtgctcgccgccgtgcac
agcctgtccgtgctgctcgccttcaccgtcctcctcaacagcgtgcagccagtcctctca
ggggtggctgtcggttcaggatggcaagcgttggtggcgtacgtgaacatcgggagctac
tacttggtcggcatccccctcggtgtcgtactcggttggccgctgcgtttcggagttggg
ggaatctggtccgggttgattggcggaaccgctgttcagacgctggtactggcctatctc
actgccagatgcgattgggatgaagaggcaaacaaagcaagtacacgaatgcgagtatgg
gccagctcaaaatga
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